* update travis.yml to reset to master LiliC/travis-minikube
* start k8s from test/
* fix workflow labels in readme
* call byok8s from .travis.yml
* make travis use python
* add byok8s tests - WIP
* update snakefile zeta workflow
* update byok8s test - test all workflows
* bump k8s version, 1.9->1.10
* update requirements for kubernetes, snakemake, s3
* fix how snakefile is being dealt with.
* moving snakefile
* add kube-system DNS fix
* updating tests with yml files to fix k8s dns container
* fix flags and remote provider approach: force s3
* fix flag
* implement coredns fixes, kubectl apply, and byok8s into travis tests
* switch to an easier task. if this build fails it is the version numbers causing problems.
* commit to lilic/travis-minikube kube-1.12 branch
* switch to python build env. no material change yet.
* add a slightly harder test
* update travis.yml to reset to master LiliC/travis-minikube
* start k8s from test/
* fix workflow labels in readme
* call byok8s from .travis.yml
* make travis use python
* convert 2018-snakemake-cli to python package (setup.py)
converts the simple example in 2018-snakemake-cli,
which used a shell script sitting in a directory to
run the Snakemake workflow, into a full-fledged
python package that uses a setup.py file.
this is a way of bridging the complexity of taco
with the simplicity of 2018-snakemake-cli.
documentation/readme has not yet been updated.
tests have not yet been udpated.
* update how/where we look for Snakefile
* add Snakefile to manifest
* move config and params to test/
* include Snakefile with Manifest.in to make it run automagically
* update readme instructions
* manifest should include files, not graft them (graft is for directories)
* update gh-pages url in setup.py
* fix tests and fix the way we are looking for param and config files (use os.getcwd())
* clean up after test
* banana -> bananas. update gitignore.
* add .travis.yml
* change newline to trigger travis
* add shields
* python version >= 3.5
* remove unused import
* travis.yml: python 3.7 -> 3.7-dev
* remove 3.7-dev from travis
* change newline to trigger travis
Charles Reid
C. Titus Brown