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ebbba235a1
fix links in readme
Charles Reid
2019-01-30 00:01:09 -0800
949119a0dd
fix typos in installing instructions
Charles Reid
2019-01-29 23:59:21 -0800
e7cde484d5
add blog link to travis tba page
Charles Reid
2019-01-29 23:57:58 -0800
924b8a83f5
update kubernetes docs
Charles Reid
2019-01-29 23:57:41 -0800
06dfc9c901
Merge branch 'add-docs'
Charles Reid
2019-01-29 23:50:43 -0800
0b860534e2
clarify gcp kubernetes guide
Charles Reid
2019-01-29 23:49:24 -0800
9c909a2fb8
add link to blog post to travis docs page
Charles Reid
2019-01-29 23:48:09 -0800
08a3250203
clarify k8s minikube instructions
Charles Reid
2019-01-29 23:43:57 -0800
b381654c71
update installation instructions to clarify and mention s3 buckets
Charles Reid
2019-01-29 23:39:55 -0800
31c31544ba
add documentation pages (#4 )
Charles Reid
2019-01-29 23:35:28 -0800
266a4d00ac
fix readme to match docs index - shorter and more succinct
Charles Reid
2019-01-29 23:33:39 -0800
95b79ef15f
update documentation to mark unfinished TBA pages
Charles Reid
2019-01-29 23:15:59 -0800
b2ab9ed8a2
add complete and tested gcp instructions
Charles Reid
2019-01-28 23:52:00 -0800
7debeb24d6
add shields for minikube, k8s, and ubuntu versions
Charles Reid
2019-01-28 22:40:46 -0800
c23f0656de
update comments in travis file, remove unnecessary redis image init
Charles Reid
2019-01-28 22:40:33 -0800
064d98c6ea
add ubuntu shields
Charles Reid
2019-01-28 22:34:36 -0800
b810e5e362
Merge branch 'better-tests' of https://github.com/charlesreid1/2019-snakemake-byok8s into better-tests
Charles Reid
2019-01-28 16:22:03 -0800
4cb9d64f25
add quickstart section to index
Charles Reid
2019-01-26 23:54:07 -0800
38fa8a624e
fix url again
Charles Reid
2019-01-26 23:48:43 -0800
41e1a23009
use https address for submodule, for travis
Charles Reid
2019-01-26 23:45:21 -0800
58cfb0cb5a
add custom css and images dir
Charles Reid
2019-01-26 23:43:04 -0800
312621a9cd
add requirements file for documentation building
Charles Reid
2019-01-26 23:42:55 -0800
b8ba8ba860
add travis tests page
Charles Reid
2019-01-26 23:42:41 -0800
1934a04bce
update gitignore for mkdocs
Charles Reid
2019-01-26 23:34:13 -0800
249b9f05cd
add mkdocs-material-dib submodule
Charles Reid
2019-01-26 23:33:35 -0800
a2b2c0ddd4
removing kubernetes md files, moved to docs/
Charles Reid
2019-01-26 23:33:32 -0800
ac9b351d4c
add fleshed out docs
Charles Reid
2019-01-26 23:33:09 -0800
4cfe1ed28d
init checkin of mkdocs site
Charles Reid
2019-01-26 23:13:10 -0800
82fbeac2a4
init commit of gh-pages branch
Charles Reid
2019-01-26 23:12:14 -0800
2b8b7855d6
add hallo werld for github pages
Charles Reid
2019-01-26 20:44:27 -0800
01a7647aae
more readme typo fixes
Charles Reid
2019-01-26 01:39:15 -0800
6515a67225
add instructions for kubernetes using minikube alone, since it is a little bit complicated on aws nodes.
Charles Reid
2019-01-26 01:33:06 -0800
2d54c50e32
Merge branch 'better-tests'
Charles Reid
2019-01-26 01:30:24 -0800
abd0fc8a6a
update readme instructions
Charles Reid
2019-01-26 01:28:36 -0800
beecef4b41
Better tests (#3 )
Charles Reid
2019-01-26 01:03:02 -0800
23769105d0
Merge branch 'master' into better-tests
Charles Reid
2019-01-26 01:02:52 -0800
104d0fe868
add a slightly harder test
Charles Reid
2019-01-26 00:57:11 -0800
9bbc217d32
switch to python build env. no material change yet.
Charles Reid
2019-01-26 00:51:51 -0800
86751c36a0
commit to lilic/travis-minikube kube-1.12 branch
Charles Reid
2019-01-26 00:47:16 -0800
cd86326b8b
switch to an easier task. if this build fails it is the version numbers causing problems.
Charles Reid
2019-01-26 00:25:17 -0800
7793f9cc32
implement coredns fixes, kubectl apply, and byok8s into travis tests
Charles Reid
2019-01-26 00:19:58 -0800
6bb04d44d7
fix flag
Charles Reid
2019-01-26 00:11:33 -0800
5b3c10d2dd
fix flags and remote provider approach: force s3
Charles Reid
2019-01-26 00:04:23 -0800
47849200d0
updating tests with yml files to fix k8s dns container
Charles Reid
2019-01-25 23:03:49 -0800
c2de3e8567
add kube-system DNS fix
Charles Reid
2019-01-25 17:17:14 -0800
3b86a9ebe2
moving snakefile
Charles Reid
2019-01-25 17:11:00 -0800
f669ff6951
fix how snakefile is being dealt with.
Charles Reid
2019-01-25 17:07:45 -0800
3c93c1b236
update requirements for kubernetes, snakemake, s3
Charles Reid
2019-01-25 13:44:49 -0800
1095efc568
bump k8s version, 1.9->1.10
Charles Reid
2019-01-25 13:44:11 -0800
46108c379e
update byok8s test - test all workflows
Charles Reid
2019-01-22 15:17:01 -0800
e47cfe66c0
update snakefile zeta workflow
Charles Reid
2019-01-22 15:14:11 -0800
d3f295d7da
add byok8s tests - WIP
Charles Reid
2019-01-22 15:00:08 -0800
e99286a4e0
update travis.yml to reset to master LiliC/travis-minikube (#2 )
Charles Reid
2019-01-22 00:35:37 -0800
d18d7416a3
make travis use python
Charles Reid
2019-01-22 00:32:15 -0800
04dce75b10
call byok8s from .travis.yml
Charles Reid
2019-01-22 00:28:46 -0800
675023537c
fix workflow labels in readme
Charles Reid
2019-01-22 00:28:15 -0800
7f537c1f8e
start k8s from test/
Charles Reid
2019-01-22 00:22:18 -0800
c2b7d2c1f6
Merge branch 'master' into reset-travis
Charles Reid
2019-01-21 21:50:47 -0800
43e9832f99
update travis.yml to reset to master LiliC/travis-minikube
Charles Reid
2019-01-21 21:46:25 -0800
8eb101ee41
try bumping versions
Charles Reid
2019-01-21 21:32:56 -0800
e1c3c36057
try localkube bootstrap and kubernetes version
Charles Reid
2019-01-21 21:26:53 -0800
fe6d0a1b7f
try localkube bootstrap
Charles Reid
2019-01-21 21:02:50 -0800
cca8aecb0e
remove hard-coded kuberentes version
Charles Reid
2019-01-21 20:55:38 -0800
76069a7c36
one line per command
Charles Reid
2019-01-21 20:50:53 -0800
67278756c4
add language to .travis.yml
Charles Reid
2019-01-21 20:47:07 -0800
f011a2bcc8
Merge branch 'fix-travis'
Charles Reid
2019-01-21 20:39:17 -0800
c7996525c4
fix travis
Charles Reid
2019-01-21 20:39:08 -0800
636b2a26d3
fix travis link
Charles Reid
2019-01-21 20:28:12 -0800
50c3e3a5f6
update order
Charles Reid
2019-01-21 20:23:39 -0800
63e21d5139
add coreutils to build deps
Charles Reid
2019-01-21 19:52:02 -0800
6563612524
Merge branch 'k8'
Charles Reid
2019-01-21 19:42:14 -0800
0b2eff8bd5
update hello/goodbye/amy/beth to alpha/gamma/red/blue
Charles Reid
2019-01-21 19:39:59 -0800
191dc78bbe
update redame
Charles Reid
2019-01-21 19:34:30 -0800
2effb8589b
Convert snakemake cli into kubernetes-ready workflow (#1 )
Charles Reid
2019-01-21 19:28:31 -0800
0f18529a53
update travis to use minikube
Charles Reid
2019-01-21 19:26:58 -0800
b28c3a75be
update readme with vm-driver setting
Charles Reid
2019-01-21 19:21:17 -0800
4fb79596b4
update instructions
Charles Reid
2019-01-21 19:16:38 -0800
db7cdcee99
update gitignore
Charles Reid
2019-01-21 19:11:47 -0800
ff69a4beb2
add python-kubernetes to requirements file
Charles Reid
2019-01-21 18:47:00 -0800
34f0077b96
update readme quickstart description
Charles Reid
2019-01-21 18:46:19 -0800
b7d9392219
update readme with byok8s command line flag updates
Charles Reid
2019-01-21 15:09:24 -0800
69df5c07bb
update cli command to use snakemake + kubernetes
Charles Reid
2019-01-21 15:00:45 -0800
945fa14a97
add notes to readme
Charles Reid
2019-01-21 12:19:19 -0800
c4fe27e883
upgrade pyyaml
Charles Reid
2019-01-20 21:33:04 -0800
7da5a5e4ba
Update README.md
Charles Reid
2019-01-17 14:20:33 -0800
05816b006d
typo sniper snipes a typo
Charles Reid
2019-01-17 13:57:32 -0800
31e2d0c3e1
banana -> bananas
Charles Reid
2019-01-17 13:53:38 -0800
d013ff2ddd
Add command line interface, python package, and tests (#1 )
Charles Reid
2019-01-17 13:51:40 -0800
b6fceb93e4
some simple workflow ideas
2018-03-16 20:47:17 -0700
Charles Reid 2019-01-30 00:01:09 -0800
C. Titus Brown
2018-03-16 20:47:17 -0700