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136 Commits

Author SHA1 Message Date
Charles Reid 55a74f7d98 Merge branch 'use-datetime' into merge-datetime-into-disqus 6 years ago
Charles Reid ab76226b0c
Merge pull request #90 from dcppc/add-dates-and-subgroups-to-emails 6 years ago
Charles Reid a4ebef6e6f extract date and time from email threads pages 6 years ago
Charles Reid bad50efa9b add groups and tags to schema; update how we determine timestamps; handle exceptions when we add the document to the writer, rather than elsewhere 6 years ago
Charles Reid 629fc063db move where exception is caught (exception was also incorrect.) 6 years ago
Charles Reid 3b0baa21de switched created_time, modified_time, indexed_time over to DATETIME. added DateParserPlugin to query QueryParser. added time fields to those being searched by default. tests do not seem to be working. 6 years ago
Charles Reid 33b8857bd0 implement stop filter; implement query variations in main query parser 6 years ago
Charles Reid 7c50fc9ff1 swap out data-commons with nihdatacommons in disqus urls 6 years ago
Charles Reid eb2cdf1437 fix a bug 6 years ago
Charles Reid c67e864581 add disqus threads to things being indexed by centillion 6 years ago
Charles Reid 25cc12cf21 turn disqus_util into a crawler object 6 years ago
Charles Reid 11c1185e62 clarify api call in disqus.md 6 years ago
Charles Reid 74cfaf8275 add more notes on hypothesis API output 6 years ago
Charles Reid 552caad135 add utilities to call disqus and hypothesis APIs 6 years ago
Charles Reid 19c42df978 update hypothesis/disqus notes 6 years ago
Charles Reid 6f30e3f120 add api output from listThreads endpoint 6 years ago
Charles Reid ad6b653e27 add all the threads 6 years ago
Charles Reid 6bfadef829
Merge pull request #73 from dcppc/feedback-floater 6 years ago
Charles Reid c38683ae9f (resolve conflict) Merge branch 'dcppc' into feedback-floater 6 years ago
Charles Reid 3f5349a5a6
Merge pull request #80 from dcppc/add-centillion-config-back 6 years ago
Charles Reid f88cf6ecad add centillion config back. no sensitive info. 6 years ago
Charles Reid ec54292a4b
Merge pull request #79 from dcppc/add-port-env-var 6 years ago
Charles Reid 296132d356 add option to set port at runtime with CENTILLION_PORT environment variable 6 years ago
Charles Reid 0bc40ba323
Merge pull request #76 from dcppc/add-whitespace 6 years ago
Charles Reid 8143e214c2 add a bit o whitespace 6 years ago
Charles Reid b015da2e9b add dismissable "thanks for your feedback" message to top 6 years ago
Charles Reid 9c6b57ba85 improve message formatting 6 years ago
Charles Reid a080eebc29 add dumy function as placeholder for where we add info messages 6 years ago
Charles Reid 323d7ce8ca return better messages 6 years ago
Charles Reid da62a5c887 add successful post call and export to JSON db 6 years ago
Charles Reid 2714ad3e0c update todo 6 years ago
Charles Reid 5e1388e8a8 move modal into its own .html file 6 years ago
Charles Reid f40cccac99 update todo with tasks 6 years ago
Charles Reid c72fc44ea7 fix button and smiley styles 6 years ago
Charles Reid cf417917c9 add /feedback post route 6 years ago
Charles Reid 8aaad93e68 Merge remote-tracking branch 'origin/dcppc' into feedback-floater 6 years ago
Charles Reid bf8d99c732
Merge pull request #71 from dcppc/hotfix/list-endpoint 6 years ago
Charles Reid 20c55891f3 remove copper requirement for /list endpoint 6 years ago
Charles Reid 685058545a feedback button successfully triggers a modal 6 years ago
Charles Reid 23fd17132e add page self-identifiers. add "send feedback" button. fix layouts. 6 years ago
Charles Reid d3ba1f11a7
Merge pull request #63 from dcppc/hotfix/search-box 6 years ago
Charles Reid 36e89fbc65 fix "Search Metadata" label so search does not break 6 years ago
Charles Reid 1390e59660
Merge pull request #59 from dcppc/hotfix/column-width 6 years ago
Charles Reid 6ca57aecd2 hot fix - specify column width 6 years ago
Charles Reid 109bdb15a1
Merge pull request #57 from dcppc/open-to-dcppc 6 years ago
Charles Reid 4885e567d0 Merge branch 'dcppc' into open-to-dcppc 6 years ago
Charles Reid 32d8bcb7ba
Merge pull request #56 from dcppc/logging-errors 6 years ago
Charles Reid a00cbbac5f clean up 403/404 templates a bit 6 years ago
Charles Reid 226db83c2a This commit opens centillion to the whole DCPPC 6 years ago
Charles Reid 70db4bb2e4 expand the default search fields 6 years ago
Charles Reid dc467faca4 add 403/404 template pages 6 years ago
Charles Reid d52e466395 add 403/404 templates and query storage 6 years ago
Charles Reid f2c7eac608
Merge pull request #52 from dcppc/fix-double-quotes-problem 6 years ago
Charles Reid 83ae43d2fb
Merge pull request #54 from dcppc/make-results-sortable 6 years ago
Charles Reid 139c3c2a56 remove sort option for content column (senseless) 6 years ago
Charles Reid d114c08674 remove unnecessary css 6 years ago
Charles Reid f958b6cf5f Updating search results page to be sortable 6 years ago
Charles Reid 76e977aedb fixes the problem that searching with double quotes returns no results 6 years ago
Charles Reid 28c421d750
Merge pull request #50 from dcppc/fix-buttons-and-labels 6 years ago
Charles Reid 0afe1e3ea1 fix broken </p> tags 6 years ago
Charles Reid 0761c39f76 Updating flask and centillion configuration docs in readme 6 years ago
Charles Reid b4a5384ba7 update control panel styles 6 years ago
Charles Reid 5a392222cb change "documents" -> "drive files" 6 years ago
Charles Reid 0145988a73 update screen shots and readme info 6 years ago
Charles Reid c22209a64a fix accordion collapse issues in HTML 6 years ago
Charles Reid 97e448d3ed fix Search: to be Search Metadata: 6 years ago
Charles Reid ce09f346ef
Merge pull request #42 from dcppc/fine-grained-control-panel 6 years ago
Charles Reid 125d7aecd0 Merge remote-tracking branch 'origin/dcppc' into fine-grained-control-panel 6 years ago
Charles Reid 7c9ef05dcc
Merge pull request #44 from dcppc/fix-landing-page-and-datatables 6 years ago
Charles Reid 3c4c73f571 fix bug with dataTables when re-opening panels 6 years ago
Charles Reid 767afba254 landing now reidrects to search if logged in 6 years ago
Charles Reid 038437788d add redirect to search index update routes, instead of render_template, to prevent accidental re-loading of re-indexing URLs 6 years ago
Charles Reid ad3ea77256 i thought this was already fixed? 6 years ago
Charles Reid c816714580 Merge remote-tracking branch 'origin/dcppc' into fine-grained-control-panel 6 years ago
Charles Reid 2b589b181b add more buttons to control panel, add more fine-grained re-indexing routes 6 years ago
Charles Reid 67c47f3552 three more typos 6 years ago
Charles Reid 2384ba54a7 two more typo fixes 6 years ago
Charles Reid fbb7fd0d2a remove unguarded emailthreads call 6 years ago
Charles Reid b22d9cf31e make the log in button actually log in 6 years ago
Charles Reid ed3783e468 remove duplicate header on landing page 6 years ago
Charles Reid fe22be8aac revert port number typo 6 years ago
Charles Reid ac21932303
Merge pull request #32 from dcppc/landing-page 6 years ago
Charles Reid 6019985486
Merge pull request #37 from dcppc/add-create-modify-date 6 years ago
Charles Reid 2dd1f0c65f
Merge pull request #39 from dcppc/fix-email-indexing-bug 6 years ago
Charles Reid f49bcc1910 Merge remote-tracking branch 'origin/dcppc' into fix-email-indexing-bug 6 years ago
Charles Reid 686a410ec8
Merge pull request #40 from dcppc/ignore-github-files 6 years ago
Charles Reid fd21f6697b update centillion search indexing logic: all or nothing (fixes problem with github files) 6 years ago
Charles Reid 4842739dc5 remove now-obsolete config file-getter 6 years ago
Charles Reid 0beed222b8 move header image to layout.html. fix rows in master list template. 6 years ago
Charles Reid ef69cb5df3 part 2: change how we import centillion config 6 years ago
Charles Reid ce76a28608 change how we import centillion config - .py not .json 6 years ago
Charles Reid 6f178df827 fix try/except blocks in update_index() method 6 years ago
Charles Reid a0a5c51725 fix bug in email threads indexing 6 years ago
Charles Reid 94f32c5b9b add created/modified date to google drive/gh issues master lists 6 years ago
Charles Reid e3d0ec7b70
Merge pull request #35 from dcppc/fix-file-indexing 6 years ago
Charles Reid 7a7bd0e223 fix github file indexing 6 years ago
Charles Reid 592d0552d9 landing page with "sign in with github" button 6 years ago
Charles Reid 9a0b21114a add first pass landing page 6 years ago
Charles Reid 401434a0a1 adding font-awesome 6 years ago
Charles Reid 1a2d9ac792 fix typo 6 years ago
Charles Reid c2dac1fb51 try/except to fix search 6 years ago
Charles Reid 837422fdc6 index everybody 6 years ago
Charles Reid e0c6a17db6 Merge branch 'dcppc' of github.com:dcppc/centillion into dcppc 6 years ago
Charles Reid 8b5f6836c3 Merge branch 'master' of github.com:dcppc/centillion into dcppc 6 years ago
Charles Reid 3311ccf421
Merge pull request #31 from dcppc/raynamharris-patch-1 6 years ago
Rayna M Harris cb42a0a72d
Update Readme.md 6 years ago
Charles Reid 9d883b0ac7
Merge pull request #22 from dcppc/groupsio-emails 6 years ago
Charles Reid b6c89a2eeb aaaand UI stuff fixed 6 years ago
Charles Reid d193e8bf90 successfully adding email threads to search index. now just UI stuff. 6 years ago
Charles Reid bc2f3b24f9 fix button padding 6 years ago
Charles Reid 811fdc1f37
Merge pull request #29 from dcppc/dcppc 6 years ago
Charles Reid 1efa5bcf87
Merge pull request #28 from dcppc/add-gdrive-main 6 years ago
Charles Reid b288928eec adding a __main__() method to the google drive utility 6 years ago
Charles Reid 57dd8bc53d
Merge pull request #24 from dcppc/add-master-list 6 years ago
Charles Reid 5c7ac07134 crown jewel: document counts now link from homepage to master_list 6 years ago
Charles Reid 0103f1a1a5 add working GET extraction to centillion master list 6 years ago
Charles Reid 331b68df83 Merge branch 'master' of github.com:dcppc/centillion into add-master-list 6 years ago
Charles Reid e743a6960d Merge branch 'master' of ssh://git.charlesreid1.com:222/charlesreid1/centillion into add-master-list 6 years ago
Charles Reid df2cf7be7d fix table sort iconographs 6 years ago
Charles Reid ac13374cd4 add dataTables plugin to layout 6 years ago
Charles Reid 31fe007ae0 add dataTables plugin files 6 years ago
Charles Reid dfb1c22610 only load api when section is expanded. add links and better formatting. 6 years ago
Charles Reid 439b72368a move github fork corner template to layout.html so it is on all pages 6 years ago
Charles Reid 1764dfa7e0 make table tag IDs consistent 6 years ago
Charles Reid d313de0d8f pass repo_url to master_list for github stuff 6 years ago
Charles Reid 46da1de8d1
Merge pull request #23 from dcppc/remove-diff-search-index-button 6 years ago
Charles Reid 325effe19c fix typos in variable names 6 years ago
Charles Reid 2d1735d0db linkify repo names in master lists 6 years ago
Charles Reid d71d3b0ec1 populating google drive file master list now works 6 years ago
Charles Reid bb233bb3d4 remove some cross-linking thing... 6 years ago
Charles Reid 7499b43841
Update Readme.md 6 years ago
Charles Reid 2bcf81a309
update license to CC0 6 years ago
Charles Reid 187bd51a77 successfully passing google drive file info from search index to flask api to javascript on page 6 years ago
Charles Reid 1e0a63dc34 added /list/gdocs endpoint that sends json, received by javascript embedded in master list page 6 years ago
Charles Reid 29127c525a add master_list route and master list template page 6 years ago
Charles Reid dfb464dc49 remove button for non-functional endpoint 6 years ago
  1. 1
      .gitignore
  2. 4268
      Disqus.md
  3. 249
      Hypothesis.md
  4. 162
      LICENSE
  5. 105
      Readme.md
  6. 54
      Todo.md
  7. 247
      centillion.py
  8. 602
      centillion_search.py
  9. 3
      config_centillion.example.py
  10. 28
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  11. 153
      disqus_util.py
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  19. 3
      gdrive_util.py
  20. 12
      get_centillion_config.py
  21. 74
      groupsio_util.py
  22. 89
      hypothesis_util.py
  23. 1
      requirements.txt
  24. 1
      static/bootstrap.min.css
  25. 1
      static/dataTables.bootstrap.min.css
  26. 8
      static/dataTables.bootstrap.min.js
  27. 106
      static/dataTables.responsive.css
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      static/feedback.js
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  38. 402
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  39. 39
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  41. 26
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  48. 244
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  49. 51
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  50. 165
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1
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@ -1,3 +1,4 @@ @@ -1,3 +1,4 @@
feedback_database.json
config_flask.py
vp
credentials.json

4268
Disqus.md

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249
Hypothesis.md

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# Hypothesis API
## Authenticating
Example output call for authenticating with the API:
```
{
"links": {
"profile": {
"read": {
"url": "https://hypothes.is/api/profile",
"method": "GET",
"desc": "Fetch the user's profile"
},
"update": {
"url": "https://hypothes.is/api/profile",
"method": "PATCH",
"desc": "Update a user's preferences"
}
},
"search": {
"url": "https://hypothes.is/api/search",
"method": "GET",
"desc": "Search for annotations"
},
"group": {
"member": {
"add": {
"url": "https://hypothes.is/api/groups/:pubid/members/:userid",
"method": "POST",
"desc": "Add the user in the request params to a group."
},
"delete": {
"url": "https://hypothes.is/api/groups/:pubid/members/:userid",
"method": "DELETE",
"desc": "Remove the current user from a group."
}
}
},
"links": {
"url": "https://hypothes.is/api/links",
"method": "GET",
"desc": "URL templates for generating URLs for HTML pages"
},
"groups": {
"read": {
"url": "https://hypothes.is/api/groups",
"method": "GET",
"desc": "Fetch the user's groups"
}
},
"annotation": {
"hide": {
"url": "https://hypothes.is/api/annotations/:id/hide",
"method": "PUT",
"desc": "Hide an annotation as a group moderator."
},
"unhide": {
"url": "https://hypothes.is/api/annotations/:id/hide",
"method": "DELETE",
"desc": "Unhide an annotation as a group moderator."
},
"read": {
"url": "https://hypothes.is/api/annotations/:id",
"method": "GET",
"desc": "Fetch an annotation"
},
"create": {
"url": "https://hypothes.is/api/annotations",
"method": "POST",
"desc": "Create an annotation"
},
"update": {
"url": "https://hypothes.is/api/annotations/:id",
"method": "PATCH",
"desc": "Update an annotation"
},
"flag": {
"url": "https://hypothes.is/api/annotations/:id/flag",
"method": "PUT",
"desc": "Flag an annotation for review."
},
"delete": {
"url": "https://hypothes.is/api/annotations/:id",
"method": "DELETE",
"desc": "Delete an annotation"
}
}
}
}
```
## Listing
Here is the result of the API call to list an annotation
given its annotation ID:
```
{
"updated": "2018-07-26T10:20:47.803636+00:00",
"group": "__world__",
"target": [
{
"source": "https://h.readthedocs.io/en/latest/api/authorization/",
"selector": [
{
"conformsTo": "https://tools.ietf.org/html/rfc3236",
"type": "FragmentSelector",
"value": "access-tokens"
},
{
"endContainer": "/div[1]/section[1]/div[1]/div[1]/div[2]/div[1]/div[1]/div[2]/p[2]",
"startContainer": "/div[1]/section[1]/div[1]/div[1]/div[2]/div[1]/div[1]/div[2]/p[1]",
"type": "RangeSelector",
"startOffset": 14,
"endOffset": 116
},
{
"type": "TextPositionSelector",
"end": 2234,
"start": 1374
},
{
"exact": "hich read or write data as a specific user need to be authorized\nwith an access token. Access tokens can be obtained in two ways:\n\nBy generating a personal API token on the Hypothesis developer\npage (you must be logged in to\nHypothesis to get to this page). This is the simplest method, however\nthese tokens are only suitable for enabling your application to make\nrequests as a single specific user.\n\nBy registering an \u201cOAuth client\u201d and\nimplementing the OAuth authentication flow\nin your application. This method allows any user to authorize your\napplication to read and write data via the API as that user. The Hypothesis\nclient is an example of an application that uses OAuth.\nSee Using OAuth for details of how to implement this method.\n\n\nOnce an access token has been obtained, requests can be authorized by putting\nthe token in the Authorization header.",
"prefix": "\n\n\nAccess tokens\u00b6\nAPI requests w",
"type": "TextQuoteSelector",
"suffix": "\nExample request:\nGET /api HTTP/"
}
]
}
],
"links": {
"json": "https://hypothes.is/api/annotations/kEaohJC9Eeiy_UOozkpkyA",
"html": "https://hypothes.is/a/kEaohJC9Eeiy_UOozkpkyA",
"incontext": "https://hyp.is/kEaohJC9Eeiy_UOozkpkyA/h.readthedocs.io/en/latest/api/authorization/"
},
"tags": [],
"text": "sdfsdf",
"created": "2018-07-26T10:20:47.803636+00:00",
"uri": "https://h.readthedocs.io/en/latest/api/authorization/",
"flagged": false,
"user_info": {
"display_name": null
},
"user": "acct:Aravindan@hypothes.is",
"hidden": false,
"document": {
"title": [
"Authorization \u2014 h 0.0.2 documentation"
]
},
"id": "kEaohJC9Eeiy_UOozkpkyA",
"permissions": {
"read": [
"group:__world__"
],
"admin": [
"acct:Aravindan@hypothes.is"
],
"update": [
"acct:Aravindan@hypothes.is"
],
"delete": [
"acct:Aravindan@hypothes.is"
]
}
}
```
## Searching
Here is the output from a call to the endpoint to search annotations
(we pass a specific URL to the search function):
```
{
"rows": [
{
"updated": "2018-08-10T02:21:46.898833+00:00",
"group": "__world__",
"target": [
{
"source": "http://pilot.data-commons.us/organize/CopperInternalDeliveryWorkFlow/",
"selector": [
{
"endContainer": "/div[1]/main[1]/div[1]/div[3]/article[1]/h2[1]",
"startContainer": "/div[1]/main[1]/div[1]/div[3]/article[1]/h2[1]",
"type": "RangeSelector",
"startOffset": 0,
"endOffset": 80
},
{
"type": "TextPositionSelector",
"end": 12328,
"start": 12248
},
{
"exact": "Deliverables are due internally on the first of each month, which here is Day 1,",
"prefix": " \n ",
"type": "TextQuoteSelector",
"suffix": "\u00b6\nDay -30 through -10\nCopper PM "
}
]
}
],
"links": {
"json": "https://hypothes.is/api/annotations/IY2W_pxEEeiVuxfD3sehjQ",
"html": "https://hypothes.is/a/IY2W_pxEEeiVuxfD3sehjQ",
"incontext": "https://hyp.is/IY2W_pxEEeiVuxfD3sehjQ/pilot.data-commons.us/organize/CopperInternalDeliveryWorkFlow/"
},
"tags": [],
"text": "This is a sample annotation",
"created": "2018-08-10T02:21:46.898833+00:00",
"uri": "http://pilot.data-commons.us/organize/CopperInternalDeliveryWorkFlow/",
"flagged": false,
"user_info": {
"display_name": null
},
"user": "acct:charlesreid1dib@hypothes.is",
"hidden": false,
"document": {
"title": [
"Copper Internal Delivery Workflow - Data Commons Internal Site"
]
},
"id": "IY2W_pxEEeiVuxfD3sehjQ",
"permissions": {
"read": [
"group:__world__"
],
"admin": [
"acct:charlesreid1dib@hypothes.is"
],
"update": [
"acct:charlesreid1dib@hypothes.is"
],
"delete": [
"acct:charlesreid1dib@hypothes.is"
]
}
}
],
"total": 1
}
```

162
LICENSE

@ -1,29 +1,133 @@ @@ -1,29 +1,133 @@
BSD 3-Clause License
Copyright (c) 2018, Charles Reid
All rights reserved.
Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are met:
* Redistributions of source code must retain the above copyright notice, this
list of conditions and the following disclaimer.
* Redistributions in binary form must reproduce the above copyright notice,
this list of conditions and the following disclaimer in the documentation
and/or other materials provided with the distribution.
* Neither the name of the copyright holder nor the names of its
contributors may be used to endorse or promote products derived from
this software without specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
# DEDICATED TO THE PUBLIC DOMAIN
The dcppc/organize repository has been dedicated to the public domain.
It is protected by the Creative Commons CC0 Universal Public Domain
Dedication license. You can read the entire license below or at
<http://creativecommons.org/publicdomain/zero/1.0/deed.en>.
# CC0 UNIVERSAL PUBLIC DOMAIN DEDICATION LICENSE
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105
Readme.md

@ -6,14 +6,19 @@ @@ -6,14 +6,19 @@
one centillion is 3.03 log-times better than a googol.
![Screen shot of centillion](docs/images/ss.png)
![Screen shot: centillion search](docs/images/search.png)
## what is it
## What Is It
Centillion (https://github.com/dcppc/centillion) is a search engine that can index
three kinds of collections: Google Documents, Github issues, and Markdown files in
Github repos.
different kinds of document collections: Google Documents (.docx files), Google Drive files,
Github issues, Github files, Github Markdown files, and Groups.io email threads.
## What Is It
We define the types of documents the centillion should index,
what info and how. The centillion then builds and
@ -25,14 +30,43 @@ defined in `centillion.py`. @@ -25,14 +30,43 @@ defined in `centillion.py`.
The centillion keeps it simple.
## authentication layer
## Authentication Layer
Centillion lives behind a Github authentication layer, implemented with
[flask-dance](https://github.com/singingwolfboy/flask-dance). When you first
visit the site it will ask you to authenticate with Github so that it can
verify you have permission to access the site.
## technologies
![Screen shot: centillion authentication](docs/images/auth.png)
## Master List
There is a master list of all content indexed by centilion at the master list page,
<https://search.nihdatacommons.us/master_list>.
A master list for each type of document indexed by the search engine is displayed
in a table:
![Screen shot: centillion master list](docs/images/master_list.png)
The metadata shown in these tables can be filtered and sorted:
![Screen shot: centillion master list with sorting](docs/images/master_list2.png)
## Control Panel
There's also a control panel at <https://search.nihdatacommons.us/control_panel>
that allows you to rebuild the search index from scratch. The search index
stores versions/contents of files locally, so re-indexing involves going out and
asking each API for new versions of a file/document/web page. When you re-index
the main search index, it will ask every API for new versions of every document.
You can also update only specific types of documents in the search index.
![Screen shot: centillion control panel](docs/images/control_panel.png)
## Technologies
Centillion is a Python program built using whoosh (search engine library). It
indexes the full text of docx files in Google Documents, just the filenames for
@ -41,16 +75,61 @@ results are grouped by issue. Centillion requires Google Drive and Github OAuth @@ -41,16 +75,61 @@ results are grouped by issue. Centillion requires Google Drive and Github OAuth
apps. Once you provide credentials to Flask you're all set to go.
## control panel
## Configuration
There's also a control panel at <https://search.nihdatacommons.us/control_panel>
that allows you to rebuild the search index from scratch (the Google Drive indexing
takes a while).
You will need to configure both the centillion search index and the flask app.
The centillion search index is configured with `config_centillion.py`; this file
sets the names of repositories to crawl when indxing issues and files.
The flask app is configured with `config_flask.py`. This file contains sensitive
information and is in the `.gitignore` file. This file contains API credentials
for Github and Groups.io.
Exampls are provided in `config_centillion.example.py` and `config_flask.example.py`.
## Authentication
The search engine will need to connect to several APIs when it re-indexes the
search index:
* Github
* Groups.io
* Google Drive
### Github
Github API credentials (both an OAuth token for the centillion app's Github
authentication mechanism, and a personal access token for accessing repositories
during the re-indexing process) are provided in `config_flask.py`.
### Groups.io
The Groups.io API token is used to index email threads. This token is provided in
`config_flask.py`.
### Google Drive
The Google Drive API credentials are provided in a file, `credentials.json`. This is
the file that is generated when the OAuth process is complete.
When you enable the Google Drive API in the Google Cloud Console, you will be provided
with a file `client_secrets.json`. To authenticate centillion with Google Drive, you should
download this file, and run the Google Drive utility directly:
```
python gdrive_util.py
```
![Screen shot of centillion control panel](docs/images/cp.png)
This will initiate the authentication procedure. Sign in as a user that has access to
the documents you want to index, and _only_ the documents you want to index (it is useful
to set up a bot account for this purpose).
Once you log in as that user, it will create `credentials.json`, and the Google Drive
re-indexing procedure should not have any problems autheticating using that file.
## quickstart (with Github auth)
## Quickstart (With Github Auth)
Start by creating a Github OAuth application.
Get the public and private application key
@ -85,7 +164,7 @@ This will start a Flask server, and you can view the minimal search engine @@ -85,7 +164,7 @@ This will start a Flask server, and you can view the minimal search engine
interface in your browser at `http://<ip>:5000`.
## troubleshooting
## Troubleshooting
If you are having problems with your callback URL being treated
as HTTP by Github, even though there is an HTTPS address, and

54
Todo.md

@ -1,47 +1,29 @@ @@ -1,47 +1,29 @@
# todo
Main task:
- hashing and caching
- <s>first, working out the logic of how we group items into sets
- needs to be deleted
- needs to be updated
- needs to be added
- for docs, issues, and comments</s>
- second, when we add or update an item, need to:
- go through the motions, download file, extract text
- check for existing indexed doc with that id
- check if existing indexed doc has same hash
- if so, skip
- otherwise, delete and re-index
ux improvements:
- feedback tools
- integrating master list into single list
- providing advanced search interfce
Other bugs:
- Some github issues have no title (?)
- <s>Need to combine issues with comments</s>
- Not able to index markdown files _in a repo_
- (Longer term) update main index vs update diff index
big picture improvements:
- hypothesis API
- folksonomy tagging with hypothesis
- tags, expanded schema
Needs:
- <s>control panel</s>
Thursday product:
- Everything re-indexed nightly
- Search engine built on all documents in Google Drive, all issues, markdown files
- Using pandoc to extract Google Drive document contents
- BRIEF quickstart documentation
Future:
- Future plans to improve - plugins, improving matching
- Subdomain plans
- Folksonomy tagging and integration plans
config options for plugins
conditional blocks with import github inside
complicated tho - better to have components split off
feedback form: where we are at
- feedback button
- button triggers modal form
- modal has emojis for feedback, text box, buttons
- clicking emojis changes color, to select
- clicking submit with filled out form submits to an endpoint
- clicking submit also closes form, but only if submit successful
feedback form: what we need to do
- fix alerts - thank you for your feedback doesn't show up until a refresh
- probably an easy ajax fix

247
centillion.py

@ -1,16 +1,18 @@ @@ -1,16 +1,18 @@
import threading
from subprocess import call
import subprocess
import codecs
import os, json
from datetime import datetime
from werkzeug.contrib.fixers import ProxyFix
from flask import Flask, request, redirect, url_for, render_template, flash
from flask import Flask, request, redirect, url_for, render_template, flash, jsonify
from flask_dance.contrib.github import make_github_blueprint, github
# create our application
from centillion_search import Search
import config_centillion
"""
The Centillion
@ -27,8 +29,9 @@ You provide: @@ -27,8 +29,9 @@ You provide:
class UpdateIndexTask(object):
def __init__(self, app_config, diff_index=False):
def __init__(self, app_config, diff_index=False,run_which='all'):
self.diff_index = diff_index
self.run_which = run_which
thread = threading.Thread(target=self.run, args=())
self.gh_token = app_config['GITHUB_TOKEN']
@ -37,6 +40,7 @@ class UpdateIndexTask(object): @@ -37,6 +40,7 @@ class UpdateIndexTask(object):
'groupsio_username' : app_config['GROUPSIO_USERNAME'],
'groupsio_password' : app_config['GROUPSIO_PASSWORD']
}
self.disqus_token = app_config['DISQUS_TOKEN']
thread.daemon = True
thread.start()
@ -46,14 +50,14 @@ class UpdateIndexTask(object): @@ -46,14 +50,14 @@ class UpdateIndexTask(object):
if(self.diff_index):
raise Exception("diff index not implemented")
from get_centillion_config import get_centillion_config
config = get_centillion_config('config_centillion.json')
search.update_index_groupsioemails(self.groupsio_credentials,config)
###search.update_index_ghfiles(self.gh_token,config)
###search.update_index_issues(self.gh_token,config)
###search.update_index_gdocs(config)
#from get_centillion_config import get_centillion_config
config = config_centillion.config
search.update_index(self.groupsio_credentials,
self.gh_token,
self.disqus_token,
self.run_which,
config)
app = Flask(__name__)
@ -70,69 +74,73 @@ github_bp = make_github_blueprint( @@ -70,69 +74,73 @@ github_bp = make_github_blueprint(
app.register_blueprint(github_bp, url_prefix="/login")
contents404 = "<html><body><h1>Status: Error 404 Page Not Found</h1></body></html>"
contents403 = "<html><body><h1>Status: Error 403 Access Denied</h1></body></html>"
contents200 = "<html><body><h1>Status: OK 200</h1></body></html>"
last_searches_file = app.config["INDEX_DIR"] + "/last_searches.txt"
##############################
# Flask routes
@app.route('/')
def index():
if not github.authorized:
return render_template("landing.html")
else:
username = github.get("/user").json()['login']
resp = github.get("/user/orgs")
if resp.ok:
# If they are in dcppc, redirect to search.
# Otherwise, hit em with a 403
all_orgs = resp.json()
for org in all_orgs:
if org['login']=='dcppc':
# Business as usual
return redirect(url_for("search", query="", fields=""))
# Not in dcppc
return render_template('403.html')
# Could not reach Github
return render_template('404.html')
@app.route('/log_in')
def log_in():
if not github.authorized:
return redirect(url_for("github.login"))
else:
username = github.get("/user").json()['login']
resp = github.get("/user/orgs")
if resp.ok:
# If they are in team copper, redirect to search.
# If they are in dcppc, redirect to search.
# Otherwise, hit em with a 403
all_orgs = resp.json()
for org in all_orgs:
if org['login']=='dcppc':
copper_team_id = '2700235'
mresp = github.get('/teams/%s/members/%s'%(copper_team_id,username))
if mresp.status_code==204:
# --------------------
# Business as usual
return redirect(url_for("search", query="", fields=""))
return contents403
# Not in dcppc
return render_template('403.html')
# Could not reach Github
return render_template('404.html')
return contents404
### @app.route('/')
### def index():
### return redirect(url_for("search", query="", fields=""))
@app.route('/search')
def search():
if not github.authorized:
return redirect(url_for("github.login"))
username = github.get("/user").json()['login']
resp = github.get("/user/orgs")
if resp.ok:
# If they are in dcppc, show them search.html
# Otherwise, hit em with a 403
all_orgs = resp.json()
for org in all_orgs:
if org['login']=='dcppc':
copper_team_id = '2700235'
mresp = github.get('/teams/%s/members/%s'%(copper_team_id,username))
if mresp.status_code==204:
# --------------------
# Business as usual
query = request.args['query']
fields = request.args.get('fields')
@ -146,6 +154,7 @@ def search(): @@ -146,6 +154,7 @@ def search():
else:
parsed_query, result = search.search(query.split(), fields=[fields])
store_search(query,fields)
totals = search.get_document_total_count()
@ -156,73 +165,189 @@ def search(): @@ -156,73 +165,189 @@ def search():
fields=fields,
totals=totals)
return contents403
# Not in dcppc
return render_template('403.html')
# Could not reach Github
return render_template('404.html')
@app.route('/update_index')
def update_index():
@app.route('/update_index/<run_which>')
def update_index(run_which):
"""
TEAM COPPER ONLY!!!
"""
if not github.authorized:
return redirect(url_for("github.login"))
username = github.get("/user").json()['login']
resp = github.get("/user/orgs")
if resp.ok:
# Only Team Copper members can update the index
all_orgs = resp.json()
for org in all_orgs:
if org['login']=='dcppc':
copper_team_id = '2700235'
mresp = github.get('/teams/%s/members/%s'%(copper_team_id,username))
if mresp.status_code==204:
# --------------------
# Business as usual
UpdateIndexTask(app.config,
diff_index=False)
diff_index=False,
run_which = run_which)
flash("Rebuilding index, check console output")
return render_template("controlpanel.html",
totals={})
return contents403
# This redirects user to /control_panel route
# to prevent accidental re-indexing
return redirect(url_for("control_panel"))
return render_template('403.html')
@app.route('/control_panel')
def control_panel():
"""
TEAM COPPER ONLY!!!
"""
if not github.authorized:
return redirect(url_for("github.login"))
username = github.get("/user").json()['login']
resp = github.get("/user/orgs")
if resp.ok:
# Only Team Copper members can access the control panel
all_orgs = resp.json()
for org in all_orgs:
if org['login']=='dcppc':
copper_team_id = '2700235'
mresp = github.get('/teams/%s/members/%s'%(copper_team_id,username))
if mresp.status_code==204:
# Business as usual
return render_template("controlpanel.html")
# Not in dcppc
return render_template('403.html')
# Could not reach Github
return render_template('404.html')
@app.route('/master_list')
def master_list():
if not github.authorized:
return redirect(url_for("github.login"))
username = github.get("/user").json()['login']
resp = github.get("/user/orgs")
if resp.ok:
# If they are in dcppc, show them masterlist.html
# Otherwise, hit em with a 403
all_orgs = resp.json()
for org in all_orgs:
if org['login']=='dcppc':
# Business as usual
return render_template("masterlist.html")
# Not in dcppc
return render_template('403.html')
# Could not reach Github
return render_template('404.html')
@app.route('/list/<doctype>')
def list_docs(doctype):
if not github.authorized:
return redirect(url_for("github.login"))
username = github.get("/user").json()['login']
resp = github.get("/user/orgs")
if resp.ok:
all_orgs = resp.json()
for org in all_orgs:
if org['login']=='dcppc':
# Business as usual
search = Search(app.config["INDEX_DIR"])
return jsonify(search.get_list(doctype))
# nope
return render_template('403.html')
@app.route('/feedback', methods=['POST'])
def parse_request():
if not github.authorized:
return redirect(url_for("github.login"))
username = github.get("/user").json()['login']
resp = github.get("/user/orgs")
if resp.ok:
all_orgs = resp.json()
for org in all_orgs:
if org['login']=='dcppc':
copper_team_id = '2700235'
mresp = github.get('/teams/%s/members/%s'%(copper_team_id,username))
if mresp.status_code==204:
try:
# Business as usual
data = request.form.to_dict();
data['github_login'] = username
data['timestamp'] = datetime.now().strftime("%Y-%m-%d %H:%M:%S")
return render_template("controlpanel.html",
totals={})
feedback_database = 'feedback_database.json'
if not os.path.isfile(feedback_database):
with open(feedback_database,'w') as f:
json_data = [data]
json.dump(json_data, f, indent=4)
return contents403
else:
json_data = []
with open(feedback_database,'r') as f:
json_data = json.load(f)
json_data.append(data)
with open(feedback_database,'w') as f:
json.dump(json_data, f, indent=4)
## Should be done with Javascript
#flash("Thank you for your feedback!")
return jsonify({'status':'ok','message':'Thank you for your feedback!'})
except:
return jsonify({'status':'error','message':'An error was encountered while submitting your feedback. Try submitting an issue in the <a href="https://github.com/dcppc/centillion/issues/new">dcppc/centillion</a> repository.'})
# nope
return render_template('403.html')
@app.errorhandler(404)
def oops(e):
return contents404
return render_template('404.html')
def store_search(query, fields):
"""
Store searches in a text file
"""
if os.path.exists(last_searches_file):
with codecs.open(last_searches_file, 'r', encoding='utf-8') as f:
contents = f.readlines()
else:
contents = []
search = "query=%s&fields=%s\n" % (query, fields)
if not search in contents:
contents.insert(0, search)
with codecs.open(last_searches_file, 'w', encoding='utf-8') as f:
f.writelines(contents)
if __name__ == '__main__':
# if running local instance, set to true
os.environ['OAUTHLIB_INSECURE_TRANSPORT'] = 'true'
app.run(host="0.0.0.0",port=5000)
port = os.environ.get('CENTILLION_PORT','')
if port=='':
port = 5000
else:
port = int(port)
app.run(host="0.0.0.0", port=port)

602
centillion_search.py

@ -5,7 +5,9 @@ from github import Github, GithubException @@ -5,7 +5,9 @@ from github import Github, GithubException
import base64
from gdrive_util import GDrive
from groupsio_util import GroupsIOArchivesCrawler
from groupsio_util import GroupsIOArchivesCrawler, GroupsIOException
from disqus_util import DisqusCrawler
from apiclient.http import MediaIoBaseDownload
import mistune
@ -17,9 +19,13 @@ import pypandoc @@ -17,9 +19,13 @@ import pypandoc
import os.path
import codecs
from datetime import datetime
import dateutil.parser
from whoosh import query
from whoosh.qparser import MultifieldParser, QueryParser
from whoosh.analysis import StemmingAnalyzer
from whoosh.analysis import StemmingAnalyzer, LowercaseFilter, StopFilter
from whoosh.qparser.dateparse import DateParserPlugin
from whoosh import fields, index
"""
@ -99,6 +105,69 @@ class Search: @@ -99,6 +105,69 @@ class Search:
self.open_index(index_folder)
# ------------------------------
# Update the entire index
def update_index(self, groupsio_credentials, gh_token, disqus_token, run_which, config):
"""
Update the entire search index
"""
if run_which=='all' or run_which=='disqus':
try:
self.update_index_disqus(disqus_token, config)
except Exception as e:
print("ERROR: While re-indexing: failed to update Disqus comment threads")
print("-"*40)
print(repr(e))
print("-"*40)
print("Continuing...")
pass
if run_which=='all' or run_which=='emailthreads':
try:
self.update_index_emailthreads(groupsio_credentials, config)
except GroupsIOException as e:
print("ERROR: While re-indexing: failed to update Groups.io email threads, hit API rate limit")
print("-"*40)
print(repr(e))
print("-"*40)
print("Continuing...")
pass
if run_which=='all' or run_which=='ghfiles':
try:
self.update_index_ghfiles(gh_token,config)
except Exception as e:
print("ERROR: While re-indexing: failed to update Github files")
print("-"*40)
print(repr(e))
print("-"*40)
print("Continuing...")
pass
if run_which=='all' or run_which=='issues':
try:
self.update_index_issues(gh_token,config)
except Exception as e:
print("ERROR: While re-indexing: failed to update Github issues")
print("-"*40)
print(repr(e))
print("-"*40)
print("Continuing...")
pass
if run_which=='all' or run_which=='gdocs':
try:
self.update_index_gdocs(config)
except Exception as e:
print("ERROR: While re-indexing: failed to update Google Drive files")
print("-"*40)
print(repr(e))
print("-"*40)
print("Continuing...")
pass
# ------------------------------
# Create a schema and open a search index
# on disk.
@ -119,7 +188,8 @@ class Search: @@ -119,7 +188,8 @@ class Search:
os.mkdir(index_folder)
exists = index.exists_in(index_folder)
stemming_analyzer = StemmingAnalyzer()
#stemming_analyzer = StemmingAnalyzer()
stemming_analyzer = StemmingAnalyzer() | LowercaseFilter() | StopFilter()
# ------------------------------
@ -127,30 +197,38 @@ class Search: @@ -127,30 +197,38 @@ class Search:
# is defined.
schema = Schema(
id = ID(stored=True, unique=True),
kind = ID(stored=True),
id = fields.ID(stored=True, unique=True),
kind = fields.ID(stored=True),
created_time = fields.DATETIME(stored=True),
modified_time = fields.DATETIME(stored=True),
indexed_time = fields.DATETIME(stored=True),
title = fields.TEXT(stored=True, field_boost=100.0),
url = fields.ID(stored=True),
created_time = ID(stored=True),
modified_time = ID(stored=True),
indexed_time = ID(stored=True),
mimetype = fields.TEXT(stored=True),
title = TEXT(stored=True, field_boost=100.0),
url = ID(stored=True, unique=True),
owner_email = fields.ID(stored=True),
owner_name = fields.TEXT(stored=True),
mimetype=ID(stored=True),
owner_email=ID(stored=True),
owner_name=TEXT(stored=True),
# mainly for email threads, groups.io, hypothesis
group = fields.ID(stored=True),
repo_name=TEXT(stored=True),
repo_url=ID(stored=True),
repo_name = fields.TEXT(stored=True),
repo_url = fields.ID(stored=True),
github_user = fields.TEXT(stored=True),
github_user=TEXT(stored=True),
tags = fields.KEYWORD(commas=True,
stored=True,
lowercase=True),
# comments only
issue_title=TEXT(stored=True, field_boost=100.0),
issue_url=ID(stored=True),
issue_title = fields.TEXT(stored=True, field_boost=100.0),
issue_url = fields.ID(stored=True),
content=TEXT(stored=True, analyzer=stemming_analyzer)
content = fields.TEXT(stored=True, analyzer=stemming_analyzer)
)
@ -190,17 +268,22 @@ class Search: @@ -190,17 +268,22 @@ class Search:
writer.delete_by_term('id',item['id'])
# Index a plain google drive file
created_time = dateutil.parser.parse(item['createdTime'])
modified_time = dateutil.parser.parse(item['modifiedTime'])
indexed_time = datetime.now().replace(microsecond=0)
try:
writer.add_document(
id = item['id'],
kind = 'gdoc',
created_time = item['createdTime'],
modified_time = item['modifiedTime'],
indexed_time = datetime.now().replace(microsecond=0).isoformat(),
created_time = created_time,
modified_time = modified_time,
indexed_time = indexed_time,
title = item['name'],
url = item['webViewLink'],
mimetype = mimetype,
owner_email = item['owners'][0]['emailAddress'],
owner_name = item['owners'][0]['displayName'],
group='',
repo_name='',
repo_url='',
github_user='',
@ -208,6 +291,9 @@ class Search: @@ -208,6 +291,9 @@ class Search:
issue_url='',
content = content
)
except ValueError as e:
print(repr(e))
print(" > XXXXXX Failed to index Google Drive file \"%s\""%(item['name']))
else:
@ -261,7 +347,7 @@ class Search: @@ -261,7 +347,7 @@ class Search:
)
assert output == ""
except RuntimeError:
print(" > XXXXXX Failed to index document \"%s\""%(item['name']))
print(" > XXXXXX Failed to index Google Drive document \"%s\""%(item['name']))
# If export was successful, read contents of markdown
@ -289,17 +375,22 @@ class Search: @@ -289,17 +375,22 @@ class Search:
else:
print(" > Creating a new record")
try:
created_time = dateutil.parser.parse(item['createdTime'])
modified_time = dateutil.parser.parse(item['modifiedTime'])
indexed_time = datetime.now()
writer.add_document(
id = item['id'],
kind = 'gdoc',
created_time = item['createdTime'],
modified_time = item['modifiedTime'],
indexed_time = datetime.now().replace(microsecond=0).isoformat(),
created_time = created_time,
modified_time = modified_time,
indexed_time = indexed_time,
title = item['name'],
url = item['webViewLink'],
mimetype = mimetype,
owner_email = item['owners'][0]['emailAddress'],
owner_name = item['owners'][0]['displayName'],
group='',
repo_name='',
repo_url='',
github_user='',
@ -307,6 +398,10 @@ class Search: @@ -307,6 +398,10 @@ class Search:
issue_url='',
content = content
)
except ValueError as e:
print(repr(e))
print(" > XXXXXX Failed to index Google Drive file \"%s\""%(item['name']))
@ -340,13 +435,14 @@ class Search: @@ -340,13 +435,14 @@ class Search:
issue_comment_content += comment.body.rstrip()
issue_comment_content += "\n"
# Now create the actual search index record
created_time = clean_timestamp(issue.created_at)
modified_time = clean_timestamp(issue.updated_at)
indexed_time = clean_timestamp(datetime.now())
# Now create the actual search index record.
# Add one document per issue thread,
# containing entire text of thread.
created_time = issue.created_at
modified_time = issue.updated_at
indexed_time = datetime.now()
try:
writer.add_document(
id = issue.html_url,
kind = 'issue',
@ -358,6 +454,7 @@ class Search: @@ -358,6 +454,7 @@ class Search:
mimetype='',
owner_email='',
owner_name='',
group='',
repo_name = repo_name,
repo_url = repo_url,
github_user = issue.user.login,
@ -365,9 +462,15 @@ class Search: @@ -365,9 +462,15 @@ class Search:
issue_url = issue.html_url,
content = issue_comment_content
)
except ValueError as e:
print(repr(e))
print(" > XXXXXX Failed to index Github issue \"%s\""%(issue.title))
# ------------------------------
# Add a single github file
# to a search index.
def add_ghfile(self, writer, d, gh_token, config, update=True):
"""
@ -391,7 +494,8 @@ class Search: @@ -391,7 +494,8 @@ class Search:
print(" > XXXXXXXX Failed to find file info.")
return
indexed_time = clean_timestamp(datetime.now())
indexed_time = datetime.now()
if fext in MARKDOWN_EXTS:
print("Indexing markdown doc %s from repo %s"%(fname,repo_name))
@ -420,17 +524,19 @@ class Search: @@ -420,17 +524,19 @@ class Search:
usable_url = "https://github.com/%s/blob/master/%s"%(repo_name, fpath)
# Now create the actual search index record
try:
writer.add_document(
id = fsha,
kind = 'markdown',
created_time = '',
modified_time = '',
created_time = None,
modified_time = None,
indexed_time = indexed_time,
title = fname,
url = usable_url,
mimetype='',
owner_email='',
owner_name='',
group='',
repo_name = repo_name,
repo_url = repo_url,
github_user = '',
@ -438,6 +544,11 @@ class Search: @@ -438,6 +544,11 @@ class Search:
issue_url = '',
content = content
)
except ValueError as e:
print(repr(e))
print(" > XXXXXX Failed to index Github markdown file \"%s\""%(fname))
else:
print("Indexing github file %s from repo %s"%(fname,repo_name))
@ -445,17 +556,19 @@ class Search: @@ -445,17 +556,19 @@ class Search:
key = fname+"_"+fsha
# Now create the actual search index record
try:
writer.add_document(
id = key,
kind = 'ghfile',
created_time = '',
modified_time = '',
created_time = None,
modified_time = None,
indexed_time = indexed_time,
title = fname,
url = repo_url,
mimetype='',
owner_email='',
owner_name='',
group='',
repo_name = repo_name,
repo_url = repo_url,
github_user = '',
@ -463,6 +576,98 @@ class Search: @@ -463,6 +576,98 @@ class Search:
issue_url = '',
content = ''
)
except ValueError as e:
print(repr(e))
print(" > XXXXXX Failed to index Github file \"%s\""%(fname))
# ------------------------------
# Add a single github file
# to a search index.
def add_emailthread(self, writer, d, config, update=True):
"""
Use a Groups.io email thread record to add
an email thread to the search index.
"""
if 'created_time' in d.keys() and d['created_time'] is not None:
created_time = d['created_time']
else:
created_time = None
if 'modified_time' in d.keys() and d['modified_time'] is not None:
modified_time = d['modified_time']
else:
modified_time = None
indexed_time = datetime.now()
# Now create the actual search index record
try:
writer.add_document(
id = d['permalink'],
kind = 'emailthread',
created_time = created_time,
modified_time = modified_time,
indexed_time = indexed_time,
title = d['subject'],
url = d['permalink'],
mimetype='',
owner_email='',
owner_name=d['original_sender'],
group=d['subgroup'],
repo_name = '',
repo_url = '',
github_user = '',
issue_title = '',
issue_url = '',
content = d['content']
)
except ValueError as e:
print(repr(e))
print(" > XXXXXX Failed to index Groups.io thread \"%s\""%(d['subject']))
# ------------------------------
# Add a single disqus comment thread
# to the search index.
def add_disqusthread(self, writer, d, config, update=True):
"""
Use a disqus comment thread record
to add a disqus comment thread to the
search index.
"""
indexed_time = datetime.now()
# created_time is already a timestamp
# Now create the actual search index record
try:
writer.add_document(
id = d['id'],
kind = 'disqus',
created_time = d['created_time'],
modified_time = None,
indexed_time = indexed_time,
title = d['title'],
url = d['link'],
mimetype='',
owner_email='',
owner_name='',
repo_name = '',
repo_url = '',
github_user = '',
issue_title = '',
issue_url = '',
content = d['content']
)
except ValueError as e:
print(repr(e))
print(" > XXXXXX Failed to index Disqus comment thread \"%s\""%(d['title']))
@ -489,9 +694,8 @@ class Search: @@ -489,9 +694,8 @@ class Search:
# Updated algorithm:
# - get set of indexed ids
# - get set of remote ids
# - drop indexed ids not in remote ids
# - drop all indexed ids
# - index all remote ids
# - add hash check in add_
# Get the set of indexed ids:
@ -540,10 +744,10 @@ class Search: @@ -540,10 +744,10 @@ class Search:
full_items[f['id']] = f
## Shorter:
#break
# Longer:
if nextPageToken is None:
break
## Longer:
#if nextPageToken is None:
# break
writer = self.ix.writer()
@ -551,7 +755,7 @@ class Search: @@ -551,7 +755,7 @@ class Search:
temp_dir = tempfile.mkdtemp(dir=os.getcwd())
print("Temporary directory: %s"%(temp_dir))
try:
# Drop any id in indexed_ids
# not in remote_ids
@ -579,6 +783,13 @@ class Search: @@ -579,6 +783,13 @@ class Search:
self.add_drive_file(writer, item, temp_dir, config, update=False)
count += 1
except Exception as e:
print("ERROR: While adding Google Drive files to search index")
print("-"*40)
print(repr(e))
print("-"*40)
print("Continuing...")
pass
print("Cleaning temporary directory: %s"%(temp_dir))
subprocess.call(['rm','-fr',temp_dir])
@ -595,12 +806,6 @@ class Search: @@ -595,12 +806,6 @@ class Search:
Update the search index using a collection of
Github repo issues and comments.
"""
# Updated algorithm:
# - get set of indexed ids
# - get set of remote ids
# - drop indexed ids not in remote ids
# - index all remote ids
# Get the set of indexed ids:
# ------
indexed_issues = set()
@ -655,28 +860,13 @@ class Search: @@ -655,28 +860,13 @@ class Search:
writer = self.ix.writer()
count = 0
# Drop any issues in indexed_issues
# not in remote_issues
drop_issues = indexed_issues - remote_issues
for drop_issue in drop_issues:
# Drop issues in indexed_issues
for drop_issue in indexed_issues:
writer.delete_by_term('id',drop_issue)
# Update any issue in indexed_issues
# and in remote_issues
update_issues = indexed_issues & remote_issues
for update_issue in update_issues:
# cop out
writer.delete_by_term('id',update_issue)
item = full_items[update_issue]
self.add_issue(writer, item, gh_token, config, update=True)
count += 1
# Add any issue not in indexed_issues
# and in remote_issues
add_issues = remote_issues - indexed_issues
for add_issue in add_issues:
# Add any issue in remote_issues
for add_issue in remote_issues:
item = full_items[add_issue]
self.add_issue(writer, item, gh_token, config, update=False)
count += 1
@ -696,17 +886,11 @@ class Search: @@ -696,17 +886,11 @@ class Search:
files (and, separately, Markdown files) from
a Github repo.
"""
# Updated algorithm:
# - get set of indexed ids
# - get set of remote ids
# - drop indexed ids not in remote ids
# - index all remote ids
# Get the set of indexed ids:
# ------
indexed_ids = set()
p = QueryParser("kind", schema=self.ix.schema)
q = p.parse("ghfiles")
q = p.parse("ghfile")
with self.ix.searcher() as s:
results = s.search(q,limit=None)
for result in results:
@ -768,7 +952,15 @@ class Search: @@ -768,7 +952,15 @@ class Search:
fpath = d['path']
_, fname = os.path.split(fpath)
_, fext = os.path.splitext(fpath)
fpathpieces = fpath.split('/')
ignore_file = fname[0]=='.' or fname[0]=='_'
ignore_dir = False
for piece in fpathpieces:
if piece[0]=='.' or piece[0]=='_':
ignore_dir = True
if not ignore_file and not ignore_dir:
key = d['sha']
d['org'] = this_org
@ -782,27 +974,13 @@ class Search: @@ -782,27 +974,13 @@ class Search:
count = 0
# Drop any id in indexed_ids
# not in remote_ids
drop_ids = indexed_ids - remote_ids
for drop_id in drop_ids:
for drop_id in indexed_ids:
writer.delete_by_term('id',drop_id)
# Update any id in indexed_ids
# Add any issue in remote_ids
# and in remote_ids
update_ids = indexed_ids & remote_ids
for update_id in update_ids:
# cop out: just delete and re-add
writer.delete_by_term('id',update_id)
item = full_items[update_id]
self.add_ghfile(writer, item, gh_token, config, update=True)
count += 1
# Add any issue not in indexed_ids
# and in remote_ids
add_ids = remote_ids - indexed_ids
for add_id in add_ids:
for add_id in remote_ids:
item = full_items[add_id]
self.add_ghfile(writer, item, gh_token, config, update=False)
count += 1
@ -817,27 +995,139 @@ class Search: @@ -817,27 +995,139 @@ class Search:
# Groups.io Emails
def update_index_groupsioemails(self, groupsio_token, config):
def update_index_emailthreads(self, groupsio_token, config):
"""
Update the search index using the email archives
of groups.io groups.
of groups.io groups. This method looks deceptively
simple, all the logic is hidden in the spider
(groupsio_util.py).
This requires the use of a spider.
RELEASE THE SPIDER!!!
"""
# Get the set of indexed ids:
# ------
indexed_ids = set()
p = QueryParser("kind", schema=self.ix.schema)
q = p.parse("emailthread")
with self.ix.searcher() as s:
results = s.search(q,limit=None)
for result in results:
indexed_ids.add(result['id'])
# Get the set of remote ids:
# ------
spider = GroupsIOArchivesCrawler(groupsio_token,'dcppc')
# - ask spider to crawl the archives
# ask spider to crawl the archives
spider.crawl_group_archives()
# - ask spider for list of all email records
# - 1 email = 1 dictionary
# - email records compiled by the spider
# now spider.archives is a dictionary
# with one key per thread ID,
# and a value set to the payload:
# '<thread-id>' : {
# 'permalink' : permalink,
# 'subject' : subject,
# 'original_sender' : original_sender,
# 'content' : full_content
# }
#
# It is hard to reliably extract more information
# than that from the email thread.
writer = self.ix.writer()
count = 0
# archives is a dictionary
# keys are IDs (urls)
# values are dictionaries
archives = spider.get_archives()
# - email object is sent off to add email method
# Start by collecting all the things
remote_ids = set()
for k in archives.keys():
remote_ids.add(k)
# drop indexed_ids
for drop_id in indexed_ids:
writer.delete_by_term('id',drop_id)
# add remote_ids
for add_id in remote_ids:
item = archives[add_id]
self.add_emailthread(writer, item, config, update=False)
count += 1
writer.commit()
print("Done, updated %d Groups.io email threads in the index" % count)
# ------------------------------
# Disqus Comments
def update_index_disqus(self, disqus_token, config):
"""
Update the search index using a collection of
Disqus comment threads from the dcppc-internal
forum.
"""
# Updated algorithm:
# - get set of indexed ids
# - get set of remote ids
# - drop all indexed ids
# - index all remote ids
# Get the set of indexed ids:
# --------------------
indexed_ids = set()
p = QueryParser("kind", schema=self.ix.schema)
q = p.parse("disqus")
with self.ix.searcher() as s:
results = s.search(q,limit=None)
for result in results:
indexed_ids.add(result['id'])
# Get the set of remote ids:
# ------
spider = DisqusCrawler(disqus_token,'dcppc-internal')
# ask spider to crawl disqus comments
spider.crawl_threads()
# spider.comments will be a dictionary
# with keys as thread IDs and values as
# a dictionary item
writer = self.ix.writer()
count = 0
# archives is a dictionary
# keys are IDs (urls)
# values are dictionaries
threads = spider.get_threads()
# Start by collecting all the things
remote_ids = set()
for k in threads.keys():
remote_ids.add(k)
# drop indexed_ids
for drop_id in indexed_ids:
writer.delete_by_term('id',drop_id)
# add remote_ids
for add_id in remote_ids:
item = threads[add_id]
self.add_disqusthread(writer, item, config, update=False)
count += 1
writer.commit()
print("Done, updated %d Disqus comment threads in the index" % count)
print("Finished indexing groups.io emails")
# ---------------------------------
@ -914,33 +1204,6 @@ class Search: @@ -914,33 +1204,6 @@ class Search:
def search(self, query_list, fields=None):
with self.ix.searcher() as searcher:
query_string = " ".join(query_list)
query = None
if "\"" in query_string or ":" in query_string:
query = QueryParser("content", self.schema).parse(query_string)
elif len(fields) == 1 and fields[0] == "filename":
pass
elif len(fields) == 2:
pass
else:
# If the user does not specify a field,
# these are the fields that are actually searched
fields = ['title',
'content']
if not query:
query = MultifieldParser(fields, schema=self.ix.schema).parse(query_string)
parsed_query = "%s" % query
print("query: %s" % parsed_query)
results = searcher.search(query, terms=False, scored=True, groupedby="kind")
search_result = self.create_search_result(results)
return parsed_query, search_result
def cap(self, s, l):
return s if len(s) <= l else s[0:l - 3] + '...'
@ -952,6 +1215,8 @@ class Search: @@ -952,6 +1215,8 @@ class Search:
"issue" : None,
"ghfile" : None,
"markdown" : None,
"emailthread" : None,
"disqus" : None,
"total" : None
}
for key in counts.keys():
@ -964,6 +1229,89 @@ class Search: @@ -964,6 +1229,89 @@ class Search:
return counts
def get_list(self,doctype):
"""
Get a listing of all files,
so we can construct the page that
lists everyone and everything that
centillion indexes.
"""
# Unfortunately, we have to treat
# each doctype separately, b/c of
# what is most relevant to display
# in the everything-list.
item_keys=''
if doctype=='gdoc':
item_keys = ['title','owner_name','url','mimetype','created_time','modified_time']
elif doctype=='issue':
item_keys = ['title','repo_name','repo_url','url','created_time','modified_time']
elif doctype=='emailthread':
item_keys = ['title','owner_name','url','created_time','modified_time']
elif doctype=='disqus':
item_keys = ['title','created_time','url']
elif doctype=='ghfile':
item_keys = ['title','repo_name','repo_url','url']
elif doctype=='markdown':
item_keys = ['title','repo_name','repo_url','url']
else:
raise Exception("Could not find document of type %s"%(doctype))
json_results = []
p = QueryParser("kind", schema=self.ix.schema)
q = p.parse(doctype)
with self.ix.searcher() as s:
results = s.search(q,limit=None)
for r in results:
d = {}
for k in item_keys:
d[k] = r[k]
json_results.append(d)
return json_results
def search(self, query_list, fields=None):
with self.ix.searcher() as searcher:
query_string = " ".join(query_list)
query = None
if ":" in query_string:
#query = QueryParser("content",
# self.schema
#).parse(query_string)
query = QueryParser("content",
self.schema,
termclass=query.Variations
)
query.add_plugin(DateParserPlugin(free=True))
query = query.parse(query_string)
elif len(fields) == 1 and fields[0] == "filename":
pass
elif len(fields) == 2:
pass
else:
# If the user does not specify a field,
# these are the fields that are actually searched
fields = ['title', 'content','owner_name','owner_email','url','created_date','modified_date']
if not query:
query = MultifieldParser(fields, schema=self.ix.schema)
query.add_plugin(DateParserPlugin(free=True))
query = query.parse(query_string)
#query = MultifieldParser(fields, schema=self.ix.schema).parse(query_string)
parsed_query = "%s" % query
print("query: %s" % parsed_query)
results = searcher.search(query, terms=False, scored=True, groupedby="kind")
search_result = self.create_search_result(results)
return parsed_query, search_result
if __name__ == "__main__":
raise Exception("Error: main method not implemented (fix groupsio credentials first)")

3
config_centillion.json → config_centillion.example.py

@ -1,4 +1,4 @@ @@ -1,4 +1,4 @@
{
config = {
"repositories" : [
"dcppc/project-management",
"dcppc/nih-demo-meetings",
@ -25,3 +25,4 @@ @@ -25,3 +25,4 @@
"dcppc/centillion"
]
}

28
config_centillion.py

@ -0,0 +1,28 @@ @@ -0,0 +1,28 @@
config = {
"repositories" : [
"dcppc/project-management",
"dcppc/nih-demo-meetings",
"dcppc/internal",
"dcppc/organize",
"dcppc/dcppc-bot",
"dcppc/full-stacks",
"dcppc/design-guidelines-discuss",
"dcppc/dcppc-deliverables",
"dcppc/dcppc-milestones",
"dcppc/crosscut-metadata",
"dcppc/lucky-penny",
"dcppc/dcppc-workshops",
"dcppc/metadata-matrix",
"dcppc/data-stewards",
"dcppc/dcppc-phase1-demos",
"dcppc/apis",
"dcppc/2018-june-workshop",
"dcppc/2018-july-workshop",
"dcppc/2018-august-workshop",
"dcppc/2018-september-workshop",
"dcppc/design-guidelines",
"dcppc/2018-may-workshop",
"dcppc/centillion"
]
}

153
disqus_util.py

@ -0,0 +1,153 @@ @@ -0,0 +1,153 @@
import os, re
import requests
import json
import dateutil.parser
from pprint import pprint
"""
Convenience class wrapper for Disqus comments.
This requires that the user provide either their
API OAuth application credentials (in which case
a user needs to authenticate with the application
so it can access the comments that they can see)
or user credentials from a previous login.
"""
class DisqusCrawler(object):
def __init__(self,
credentials,
group_name):
self.credentials = credentials
self.group_name = group_name
self.crawled_comments = False
self.threads = None
def get_threads(self):
"""
Return a list of dictionaries containing
entries for each comment thread in the given
disqus forum.
"""
return self.threads
def crawl_threads(self):
"""
This will use the API to get every thread,
and will iterate through every thread to
get every comment thread.
"""
# The money shot
threads = {}
# list all threads
list_threads_url = 'https://disqus.com/api/3.0/threads/list.json'
# list all posts (comments)
list_posts_url = 'https://disqus.com/api/3.0/threads/listPosts.json'
base_params = dict(
api_key=self.credentials,
forum=self.group_name
)
# prepare url params
params = {}
for k in base_params.keys():
params[k] = base_params[k]
# make api call (first loop in fencepost)
results = requests.request('GET', list_threads_url, params=params).json()
cursor = results['cursor']
responses = results['response']
while True:
for response in responses:
if '127.0.0.1' not in response['link'] and 'localhost' not in response['link']:
# Save thread info
thread_id = response['id']
thread_count = response['posts']
print("Working on thread %s (%d posts)"%(thread_id,thread_count))
if thread_count > 0:
# prepare url params
params_comments = {}
for k in base_params.keys():
params_comments[k] = base_params[k]
params_comments['thread'] = thread_id
# make api call
results_comments = requests.request('GET', list_posts_url, params=params_comments).json()
cursor_comments = results_comments['cursor']
responses_comments = results_comments['response']
# Save comments for this thread
thread_comments = []
while True:
for comment in responses_comments:
# Save comment info
print(" + %s"%(comment['message']))
thread_comments.append(comment['message'])
if cursor_comments['hasNext']:
# Prepare for the next URL call
params_comments = {}
for k in base_params.keys():
params_comments[k] = base_params[k]
params_comments['thread'] = thread_id
params_comments['cursor'] = cursor_comments['next']
# Make the next URL call
results_comments = requests.request('GET', list_posts_url, params=params_comments).json()
cursor_comments = results_comments['cursor']
responses_comments = results_comments['response']
else:
break
link = response['link']
clean_link = re.sub('data-commons.us','nihdatacommons.us',link)
# Finished working on thread.
# We need to make this value a dictionary
thread_info = dict(
id = response['id'],
created_time = dateutil.parser.parse(response['createdAt']),
title = response['title'],
forum = response['forum'],
link = clean_link,
content = "\n\n-----".join(thread_comments)
)
threads[thread_id] = thread_info
if 'hasNext' in cursor.keys() and cursor['hasNext']:
# Prepare for next URL call
params = {}
for k in base_params.keys():
params[k] = base_params[k]
params['cursor'] = cursor['next']
# Make the next URL call
results = requests.request('GET', list_threads_url, params=params).json()
cursor = results['cursor']
responses = results['response']
else:
break
self.threads = threads

BIN
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3
gdrive_util.py

@ -51,3 +51,6 @@ class GDrive(object): @@ -51,3 +51,6 @@ class GDrive(object):
service = build('drive', 'v3', http=creds.authorize(Http()))
return service
if __name__=="__main__":
g = GDrive()
s = g.get_service()

12
get_centillion_config.py

@ -1,12 +0,0 @@ @@ -1,12 +0,0 @@
import json
CONFIG_FILE = 'config_centillion.json'
def get_centillion_config(filename=CONFIG_FILE):
"""
Load the centillion configuration
"""
with open(filename,'r') as f:
d = json.load(f)
return d

74
groupsio_util.py

@ -1,5 +1,10 @@ @@ -1,5 +1,10 @@
import requests, os, re
from bs4 import BeautifulSoup
import dateutil.parser
import datetime
class GroupsIOException(Exception):
pass
class GroupsIOArchivesCrawler(object):
"""
@ -59,6 +64,10 @@ class GroupsIOArchivesCrawler(object): @@ -59,6 +64,10 @@ class GroupsIOArchivesCrawler(object):
v = re.sub(r'dcppc\+','',group['name'])
subgroups[k] = v
## Short circuit
## for debugging purposes
break
return subgroups
@ -67,6 +76,8 @@ class GroupsIOArchivesCrawler(object): @@ -67,6 +76,8 @@ class GroupsIOArchivesCrawler(object):
Spider will crawl the email archives of the entire group
by crawling the email archives of each subgroup.
"""
self.archives = {}
subgroups = self.get_subgroups_list()
# ------------------------------
@ -98,9 +109,9 @@ class GroupsIOArchivesCrawler(object): @@ -98,9 +109,9 @@ class GroupsIOArchivesCrawler(object):
# Done. archives are now tucked away
# in the variable self.archives
#
# self.archives is a list of dictionaries,
# with each dictionary containing info about
# a topic/email thread in a subgroup.
# self.archives is a dictionary of dictionaries,
# with each key a URL and each value a dictionary
# containing info about a thread.
# ------------------------------
@ -138,8 +149,6 @@ class GroupsIOArchivesCrawler(object): @@ -138,8 +149,6 @@ class GroupsIOArchivesCrawler(object):
list of dictionaries.
"""
self.archives = []
prefix = "https://{group}.groups.io".format(group=self.group_name)
url = self.url.format(group=self.group_name,
@ -244,7 +253,7 @@ class GroupsIOArchivesCrawler(object): @@ -244,7 +253,7 @@ class GroupsIOArchivesCrawler(object):
subject = soup.find('title').text
# Extract information for the schema:
# - permalink for thread (done)
# - permalink for thread (done above)
# - subject/title (done)
# - original sender email/name (done)
# - content (done)
@ -259,11 +268,35 @@ class GroupsIOArchivesCrawler(object): @@ -259,11 +268,35 @@ class GroupsIOArchivesCrawler(object):
pass
else:
# found an email!
# this is a maze, thanks groups.io
# this is a maze, not amazing.
# thanks groups.io!
td = tr.find('td')
divrow = td.find('div',{'class':'row'}).find('div',{'class':'pull-left'})
sender_divrow = td.find('div',{'class':'row'})
sender_divrow = sender_divrow.find('div',{'class':'pull-left'})
if (i+1)==1:
original_sender = sender_divrow.text.strip()
date_divrow = td.find('div',{'class':'row'})
date_divrow = date_divrow.find('div',{'class':'pull-right'})
date_divrow = date_divrow.find('font',{'class':'text-muted'})
date_divrow = date_divrow.find('script').text
try:
time_seconds = re.search(' [0-9]{1,} ',date_divrow).group(0)
time_seconds = time_seconds.strip()
# Thanks groups.io for the weird date formatting
time_seconds = time_seconds[:10]
mmicro_seconds = time_seconds[10:]
if (i+1)==1:
original_sender = divrow.text.strip()
created_time = datetime.datetime.utcfromtimestamp(int(time_seconds))
modified_time = datetime.datetime.utcfromtimestamp(int(time_seconds))
else:
modified_time = datetime.datetime.utcfromtimestamp(int(time_seconds))
except AttributeError:
created_time = None
modified_time = None
for div in td.find_all('div'):
if div.has_attr('id'):
@ -292,19 +325,16 @@ class GroupsIOArchivesCrawler(object): @@ -292,19 +325,16 @@ class GroupsIOArchivesCrawler(object):
thread = {
'permalink' : permalink,
'created_time' : created_time,
'modified_time' : modified_time,
'subject' : subject,
'subgroup' : subgroup_name,
'original_sender' : original_sender,
'content' : full_content
}
print('*'*40)
for k in thread.keys():
if k=='content':
pass
else:
print("%s : %s"%(k,thread[k]))
print('*'*40)
self.archives.append(thread)
print(" + Archiving thread: %s"%(thread['subject']))
self.archives[permalink] = thread
def extract_archive_page_items_(self, response):
@ -319,15 +349,17 @@ class GroupsIOArchivesCrawler(object): @@ -319,15 +349,17 @@ class GroupsIOArchivesCrawler(object):
soup = BeautifulSoup(response.content,"html.parser")
rows = soup.find_all('tr',{'class':'test'})
if 'rate limited' in soup.text:
raise Exception("Error: rate limit in place for Groups.io")
raise GroupsIOException("Error: rate limit in place for Groups.io")
results = []
for row in rows:
# We don't care about anything except title and ugly link
# This is where we extract
# a list of thread titles
# and corresponding links.
subject = row.find('span',{'class':'subject'})
title = subject.get_text()
link = row.find('a')['href']
print(title)
results.append((title,link))
return results
@ -375,7 +407,7 @@ class GroupsIOArchivesCrawler(object): @@ -375,7 +407,7 @@ class GroupsIOArchivesCrawler(object):
if csrf=='':
err = "ERROR: Could not find csrf token on page."
raise Exception(err)
raise GroupsIOException(err)
return csrf

89
hypothesis_util.py

@ -0,0 +1,89 @@ @@ -0,0 +1,89 @@
import requests
import json
import os
def get_headers():
if 'HYPOTHESIS_TOKEN' in os.environ:
token = os.environ['HYPOTHESIS_TOKEN']
else:
raise Exception("Need to specify Hypothesis token with HYPOTHESIS_TOKEN env var")
auth_header = 'Bearer %s'%(token)
return {'Authorization': auth_header}
def basic_auth():
url = ' https://hypothes.is/api'
# Get the authorization header
headers = get_headers()
# Make the request
response = requests.get(url, headers=headers)
if response.status_code==200:
# Interpret results as JSON
dat = response.json()
print(json.dumps(dat, indent=4))
else:
print("Response status code was not OK: %d"%(response.status_code))
def list_annotations():
# kEaohJC9Eeiy_UOozkpkyA
url = 'https://hypothes.is/api/annotations/kEaohJC9Eeiy_UOozkpkyA'
# Get the authorization header
headers = get_headers()
# Make the request
response = requests.get(url, headers=headers)
if response.status_code==200:
# Interpret results as JSON
dat = response.json()
print(json.dumps(dat, indent=4))
else:
print("Response status code was not OK: %d"%(response.status_code))
def search_annotations():
url = ' https://hypothes.is/api/search'
# Get the authorization header
headers = get_headers()
# Set query params
params = dict(
url = '*pilot.nihdatacommons.us*',
limit = 200
)
#http://pilot.nihdatacommons.us/organize/CopperInternalDeliveryWorkFlow/',
# Make the request
response = requests.get(url, headers=headers, params=params)
if response.status_code==200:
# Interpret results as JSON
dat = response.json()
print(json.dumps(dat, indent=4))
else:
print("Response status code was not OK: %d"%(response.status_code))
if __name__=="__main__":
search_annotations()

1
requirements.txt

@ -11,3 +11,4 @@ requests>=2.19 @@ -11,3 +11,4 @@ requests>=2.19
pandoc>=1.0
flask-dance>=1.0.0
beautifulsoup4>=4.6
python-dateutil>=2.6

1
static/bootstrap.min.css vendored

File diff suppressed because one or more lines are too long

1
static/dataTables.bootstrap.min.css vendored

@ -0,0 +1 @@ @@ -0,0 +1 @@
table.dataTable{clear:both;margin-top:6px !important;margin-bottom:6px !important;max-width:none !important;border-collapse:separate !important}table.dataTable td,table.dataTable th{-webkit-box-sizing:content-box;box-sizing:content-box}table.dataTable td.dataTables_empty,table.dataTable th.dataTables_empty{text-align:center}table.dataTable.nowrap th,table.dataTable.nowrap td{white-space:nowrap}div.dataTables_wrapper div.dataTables_length label{font-weight:normal;text-align:left;white-space:nowrap}div.dataTables_wrapper div.dataTables_length select{width:75px;display:inline-block}div.dataTables_wrapper div.dataTables_filter{text-align:right}div.dataTables_wrapper div.dataTables_filter label{font-weight:normal;white-space:nowrap;text-align:left}div.dataTables_wrapper div.dataTables_filter input{margin-left:0.5em;display:inline-block;width:auto}div.dataTables_wrapper div.dataTables_info{padding-top:8px;white-space:nowrap}div.dataTables_wrapper div.dataTables_paginate{margin:0;white-space:nowrap;text-align:right}div.dataTables_wrapper div.dataTables_paginate ul.pagination{margin:2px 0;white-space:nowrap}div.dataTables_wrapper div.dataTables_processing{position:absolute;top:50%;left:50%;width:200px;margin-left:-100px;margin-top:-26px;text-align:center;padding:1em 0}table.dataTable thead>tr>th.sorting_asc,table.dataTable thead>tr>th.sorting_desc,table.dataTable thead>tr>th.sorting,table.dataTable thead>tr>td.sorting_asc,table.dataTable thead>tr>td.sorting_desc,table.dataTable thead>tr>td.sorting{padding-right:30px}table.dataTable thead>tr>th:active,table.dataTable thead>tr>td:active{outline:none}table.dataTable thead .sorting,table.dataTable thead .sorting_asc,table.dataTable thead .sorting_desc,table.dataTable thead .sorting_asc_disabled,table.dataTable thead .sorting_desc_disabled{cursor:pointer;position:relative}table.dataTable thead .sorting:after,table.dataTable thead .sorting_asc:after,table.dataTable thead .sorting_desc:after,table.dataTable thead .sorting_asc_disabled:after,table.dataTable thead .sorting_desc_disabled:after{position:absolute;bottom:8px;right:8px;display:block;font-family:'Glyphicons Halflings';opacity:0.5}table.dataTable thead .sorting:after{opacity:0.2;content:"---"}table.dataTable thead .sorting_asc:after{content:"/\\"}table.dataTable thead .sorting_desc:after{content:"\\/"}table.dataTable thead .sorting_asc_disabled:after,table.dataTable thead .sorting_desc_disabled:after{color:#eee}div.dataTables_scrollHead table.dataTable{margin-bottom:0 !important}div.dataTables_scrollBody>table{border-top:none;margin-top:0 !important;margin-bottom:0 !important}div.dataTables_scrollBody>table>thead .sorting:after,div.dataTables_scrollBody>table>thead .sorting_asc:after,div.dataTables_scrollBody>table>thead .sorting_desc:after{display:none}div.dataTables_scrollBody>table>tbody>tr:first-child>th,div.dataTables_scrollBody>table>tbody>tr:first-child>td{border-top:none}div.dataTables_scrollFoot>.dataTables_scrollFootInner{box-sizing:content-box}div.dataTables_scrollFoot>.dataTables_scrollFootInner>table{margin-top:0 !important;border-top:none}@media screen and (max-width: 767px){div.dataTables_wrapper div.dataTables_length,div.dataTables_wrapper div.dataTables_filter,div.dataTables_wrapper div.dataTables_info,div.dataTables_wrapper div.dataTables_paginate{text-align:center}}table.dataTable.table-condensed>thead>tr>th{padding-right:20px}table.dataTable.table-condensed .sorting:after,table.dataTable.table-condensed .sorting_asc:after,table.dataTable.table-condensed .sorting_desc:after{top:6px;right:6px}table.table-bordered.dataTable th,table.table-bordered.dataTable td{border-left-width:0}table.table-bordered.dataTable th:last-child,table.table-bordered.dataTable th:last-child,table.table-bordered.dataTable td:last-child,table.table-bordered.dataTable td:last-child{border-right-width:0}table.table-bordered.dataTable tbody th,table.table-bordered.dataTable tbody td{border-bottom-width:0}div.dataTables_scrollHead table.table-bordered{border-bottom-width:0}div.table-responsive>div.dataTables_wrapper>div.row{margin:0}div.table-responsive>div.dataTables_wrapper>div.row>div[class^="col-"]:first-child{padding-left:0}div.table-responsive>div.dataTables_wrapper>div.row>div[class^="col-"]:last-child{padding-right:0}

8
static/dataTables.bootstrap.min.js vendored

@ -0,0 +1,8 @@ @@ -0,0 +1,8 @@
/*!
DataTables Bootstrap 3 integration
©2011-2014 SpryMedia Ltd - datatables.net/license
*/
(function(){var f=function(c,b){c.extend(!0,b.defaults,{dom:"<'row'<'col-sm-6'l><'col-sm-6'f>><'row'<'col-sm-12'tr>><'row'<'col-sm-6'i><'col-sm-6'p>>",renderer:"bootstrap"});c.extend(b.ext.classes,{sWrapper:"dataTables_wrapper form-inline dt-bootstrap",sFilterInput:"form-control input-sm",sLengthSelect:"form-control input-sm"});b.ext.renderer.pageButton.bootstrap=function(g,f,p,k,h,l){var q=new b.Api(g),r=g.oClasses,i=g.oLanguage.oPaginate,d,e,o=function(b,f){var j,m,n,a,k=function(a){a.preventDefault();
c(a.currentTarget).hasClass("disabled")||q.page(a.data.action).draw(!1)};j=0;for(m=f.length;j<m;j++)if(a=f[j],c.isArray(a))o(b,a);else{e=d="";switch(a){case "ellipsis":d="&hellip;";e="disabled";break;case "first":d=i.sFirst;e=a+(0<h?"":" disabled");break;case "previous":d=i.sPrevious;e=a+(0<h?"":" disabled");break;case "next":d=i.sNext;e=a+(h<l-1?"":" disabled");break;case "last":d=i.sLast;e=a+(h<l-1?"":" disabled");break;default:d=a+1,e=h===a?"active":""}d&&(n=c("<li>",{"class":r.sPageButton+" "+
e,"aria-controls":g.sTableId,tabindex:g.iTabIndex,id:0===p&&"string"===typeof a?g.sTableId+"_"+a:null}).append(c("<a>",{href:"#"}).html(d)).appendTo(b),g.oApi._fnBindAction(n,{action:a},k))}};o(c(f).empty().html('<ul class="pagination"/>').children("ul"),k)};b.TableTools&&(c.extend(!0,b.TableTools.classes,{container:"DTTT btn-group",buttons:{normal:"btn btn-default",disabled:"disabled"},collection:{container:"DTTT_dropdown dropdown-menu",buttons:{normal:"",disabled:"disabled"}},print:{info:"DTTT_print_info"},
select:{row:"active"}}),c.extend(!0,b.TableTools.DEFAULTS.oTags,{collection:{container:"ul",button:"li",liner:"a"}}))};"function"===typeof define&&define.amd?define(["jquery","datatables"],f):"object"===typeof exports?f(require("jquery"),require("datatables")):jQuery&&f(jQuery,jQuery.fn.dataTable)})(window,document);

106
static/dataTables.responsive.css

@ -0,0 +1,106 @@ @@ -0,0 +1,106 @@
table.dataTable.dtr-inline.collapsed > tbody > tr > td:first-child,
table.dataTable.dtr-inline.collapsed > tbody > tr > th:first-child {
position: relative;
padding-left: 30px;
cursor: pointer;
}
table.dataTable.dtr-inline.collapsed > tbody > tr > td:first-child:before,
table.dataTable.dtr-inline.collapsed > tbody > tr > th:first-child:before {
top: 8px;
left: 4px;
height: 16px;
width: 16px;
display: block;
position: absolute;
color: white;
border: 2px solid white;
border-radius: 16px;
text-align: center;
line-height: 14px;
box-shadow: 0 0 3px #444;
box-sizing: content-box;
content: '+';
background-color: #31b131;
}
table.dataTable.dtr-inline.collapsed > tbody > tr > td:first-child.dataTables_empty:before,
table.dataTable.dtr-inline.collapsed > tbody > tr > th:first-child.dataTables_empty:before {
display: none;
}
table.dataTable.dtr-inline.collapsed > tbody > tr.parent > td:first-child:before,
table.dataTable.dtr-inline.collapsed > tbody > tr.parent > th:first-child:before {
content: '-';
background-color: #d33333;
}
table.dataTable.dtr-inline.collapsed > tbody > tr.child td:before {
display: none;
}
table.dataTable.dtr-inline.collapsed.compact > tbody > tr > td:first-child,
table.dataTable.dtr-inline.collapsed.compact > tbody > tr > th:first-child {
padding-left: 27px;
}
table.dataTable.dtr-inline.collapsed.compact > tbody > tr > td:first-child:before,
table.dataTable.dtr-inline.collapsed.compact > tbody > tr > th:first-child:before {
top: 5px;
left: 4px;
height: 14px;
width: 14px;
border-radius: 14px;
line-height: 12px;
}
table.dataTable.dtr-column > tbody > tr > td.control,
table.dataTable.dtr-column > tbody > tr > th.control {
position: relative;
cursor: pointer;
}
table.dataTable.dtr-column > tbody > tr > td.control:before,
table.dataTable.dtr-column > tbody > tr > th.control:before {
top: 50%;
left: 50%;
height: 16px;
width: 16px;
margin-top: -10px;
margin-left: -10px;
display: block;
position: absolute;
color: white;
border: 2px solid white;
border-radius: 16px;
text-align: center;
line-height: 14px;
box-shadow: 0 0 3px #444;
box-sizing: content-box;
content: '+';
background-color: #31b131;
}
table.dataTable.dtr-column > tbody > tr.parent td.control:before,
table.dataTable.dtr-column > tbody > tr.parent th.control:before {
content: '-';
background-color: #d33333;
}
table.dataTable > tbody > tr.child {
padding: 0.5em 1em;
}
table.dataTable > tbody > tr.child:hover {
background: transparent !important;
}
table.dataTable > tbody > tr.child ul {
display: inline-block;
list-style-type: none;
margin: 0;
padding: 0;
}
table.dataTable > tbody > tr.child ul li {
border-bottom: 1px solid #efefef;
padding: 0.5em 0;
}
table.dataTable > tbody > tr.child ul li:first-child {
padding-top: 0;
}
table.dataTable > tbody > tr.child ul li:last-child {
border-bottom: none;
}
table.dataTable > tbody > tr.child span.dtr-title {
display: inline-block;
min-width: 75px;
font-weight: bold;
}

873
static/dataTables.responsive.js

@ -0,0 +1,873 @@ @@ -0,0 +1,873 @@
/*! Responsive 1.0.6
* 2014-2015 SpryMedia Ltd - datatables.net/license
*/
/**
* @summary Responsive
* @description Responsive tables plug-in for DataTables
* @version 1.0.6
* @file dataTables.responsive.js
* @author SpryMedia Ltd (www.sprymedia.co.uk)
* @contact www.sprymedia.co.uk/contact
* @copyright Copyright 2014-2015 SpryMedia Ltd.
*
* This source file is free software, available under the following license:
* MIT license - http://datatables.net/license/mit
*
* This source file is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY
* or FITNESS FOR A PARTICULAR PURPOSE. See the license files for details.
*
* For details please refer to: http://www.datatables.net
*/
(function(window, document, undefined) {
var factory = function( $, DataTable ) {
"use strict";
/**
* Responsive is a plug-in for the DataTables library that makes use of
* DataTables' ability to change the visibility of columns, changing the
* visibility of columns so the displayed columns fit into the table container.
* The end result is that complex tables will be dynamically adjusted to fit
* into the viewport, be it on a desktop, tablet or mobile browser.
*
* Responsive for DataTables has two modes of operation, which can used
* individually or combined:
*
* * Class name based control - columns assigned class names that match the
* breakpoint logic can be shown / hidden as required for each breakpoint.
* * Automatic control - columns are automatically hidden when there is no
* room left to display them. Columns removed from the right.
*
* In additional to column visibility control, Responsive also has built into
* options to use DataTables' child row display to show / hide the information
* from the table that has been hidden. There are also two modes of operation
* for this child row display:
*
* * Inline - when the control element that the user can use to show / hide
* child rows is displayed inside the first column of the table.
* * Column - where a whole column is dedicated to be the show / hide control.
*
* Initialisation of Responsive is performed by:
*
* * Adding the class `responsive` or `dt-responsive` to the table. In this case
* Responsive will automatically be initialised with the default configuration
* options when the DataTable is created.
* * Using the `responsive` option in the DataTables configuration options. This
* can also be used to specify the configuration options, or simply set to
* `true` to use the defaults.
*
* @class
* @param {object} settings DataTables settings object for the host table
* @param {object} [opts] Configuration options
* @requires jQuery 1.7+
* @requires DataTables 1.10.1+
*
* @example
* $('#example').DataTable( {
* responsive: true
* } );
* } );
*/
var Responsive = function ( settings, opts ) {
// Sanity check that we are using DataTables 1.10 or newer
if ( ! DataTable.versionCheck || ! DataTable.versionCheck( '1.10.1' ) ) {
throw 'DataTables Responsive requires DataTables 1.10.1 or newer';
}
this.s = {
dt: new DataTable.Api( settings ),
columns: []
};
// Check if responsive has already been initialised on this table
if ( this.s.dt.settings()[0].responsive ) {
return;
}
// details is an object, but for simplicity the user can give it as a string
if ( opts && typeof opts.details === 'string' ) {
opts.details = { type: opts.details };
}
this.c = $.extend( true, {}, Responsive.defaults, DataTable.defaults.responsive, opts );
settings.responsive = this;
this._constructor();
};
Responsive.prototype = {
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Constructor
*/
/**
* Initialise the Responsive instance
*
* @private
*/
_constructor: function ()
{
var that = this;
var dt = this.s.dt;
dt.settings()[0]._responsive = this;
// Use DataTables' private throttle function to avoid processor thrashing
$(window).on( 'resize.dtr orientationchange.dtr', dt.settings()[0].oApi._fnThrottle( function () {
that._resize();
} ) );
// Destroy event handler
dt.on( 'destroy.dtr', function () {
$(window).off( 'resize.dtr orientationchange.dtr draw.dtr' );
} );
// Reorder the breakpoints array here in case they have been added out
// of order
this.c.breakpoints.sort( function (a, b) {
return a.width < b.width ? 1 :
a.width > b.width ? -1 : 0;
} );
// Determine which columns are already hidden, and should therefore
// remain hidden. todo - should this be done? See thread 22677
//
// this.s.alwaysHidden = dt.columns(':hidden').indexes();
this._classLogic();
this._resizeAuto();
// Details handler
var details = this.c.details;
if ( details.type ) {
that._detailsInit();
this._detailsVis();
dt.on( 'column-visibility.dtr', function () {
that._detailsVis();
} );
// Redraw the details box on each draw. This is used until
// DataTables implements a native `updated` event for rows
dt.on( 'draw.dtr', function () {
dt.rows( {page: 'current'} ).iterator( 'row', function ( settings, idx ) {
var row = dt.row( idx );
if ( row.child.isShown() ) {
var info = that.c.details.renderer( dt, idx );
row.child( info, 'child' ).show();
}
} );
} );
$(dt.table().node()).addClass( 'dtr-'+details.type );
}
// First pass - draw the table for the current viewport size
this._resize();
},
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Private methods
*/
/**
* Calculate the visibility for the columns in a table for a given
* breakpoint. The result is pre-determined based on the class logic if
* class names are used to control all columns, but the width of the table
* is also used if there are columns which are to be automatically shown
* and hidden.
*
* @param {string} breakpoint Breakpoint name to use for the calculation
* @return {array} Array of boolean values initiating the visibility of each
* column.
* @private
*/
_columnsVisiblity: function ( breakpoint )
{
var dt = this.s.dt;
var columns = this.s.columns;
var i, ien;
// Class logic - determine which columns are in this breakpoint based
// on the classes. If no class control (i.e. `auto`) then `-` is used
// to indicate this to the rest of the function
var display = $.map( columns, function ( col ) {
return col.auto && col.minWidth === null ?
false :
col.auto === true ?
'-' :
$.inArray( breakpoint, col.includeIn ) !== -1;
} );
// Auto column control - first pass: how much width is taken by the
// ones that must be included from the non-auto columns
var requiredWidth = 0;
for ( i=0, ien=display.length ; i<ien ; i++ ) {
if ( display[i] === true ) {
requiredWidth += columns[i].minWidth;
}
}
// Second pass, use up any remaining width for other columns. For
// scrolling tables we need to subtract the width of the scrollbar. It
// may not be requires which makes this sub-optimal, but it would
// require another full redraw to make complete use of those extra few
// pixels
var scrolling = dt.settings()[0].oScroll;
var bar = scrolling.sY || scrolling.sX ? scrolling.iBarWidth : 0;
var widthAvailable = dt.table().container().offsetWidth - bar;
var usedWidth = widthAvailable - requiredWidth;
// Control column needs to always be included. This makes it sub-
// optimal in terms of using the available with, but to stop layout
// thrashing or overflow. Also we need to account for the control column
// width first so we know how much width is available for the other
// columns, since the control column might not be the first one shown
for ( i=0, ien=display.length ; i<ien ; i++ ) {
if ( columns[i].control ) {
usedWidth -= columns[i].minWidth;
}
}
// Allow columns to be shown (counting from the left) until we run out
// of room
var empty = false;
for ( i=0, ien=display.length ; i<ien ; i++ ) {
if ( display[i] === '-' && ! columns[i].control ) {
// Once we've found a column that won't fit we don't let any
// others display either, or columns might disappear in the
// middle of the table
if ( empty || usedWidth - columns[i].minWidth < 0 ) {
empty = true;
display[i] = false;
}
else {
display[i] = true;
}
usedWidth -= columns[i].minWidth;
}
}
// Determine if the 'control' column should be shown (if there is one).
// This is the case when there is a hidden column (that is not the
// control column). The two loops look inefficient here, but they are
// trivial and will fly through. We need to know the outcome from the
// first , before the action in the second can be taken
var showControl = false;
for ( i=0, ien=columns.length ; i<ien ; i++ ) {
if ( ! columns[i].control && ! columns[i].never && ! display[i] ) {
showControl = true;
break;
}
}
for ( i=0, ien=columns.length ; i<ien ; i++ ) {
if ( columns[i].control ) {
display[i] = showControl;
}
}
// Finally we need to make sure that there is at least one column that
// is visible
if ( $.inArray( true, display ) === -1 ) {
display[0] = true;
}
return display;
},
/**
* Create the internal `columns` array with information about the columns
* for the table. This includes determining which breakpoints the column
* will appear in, based upon class names in the column, which makes up the
* vast majority of this method.
*
* @private
*/
_classLogic: function ()
{
var that = this;
var calc = {};
var breakpoints = this.c.breakpoints;
var columns = this.s.dt.columns().eq(0).map( function (i) {
var className = this.column(i).header().className;
return {
className: className,
includeIn: [],
auto: false,
control: false,
never: className.match(/\bnever\b/) ? true : false
};
} );
// Simply add a breakpoint to `includeIn` array, ensuring that there are
// no duplicates
var add = function ( colIdx, name ) {
var includeIn = columns[ colIdx ].includeIn;
if ( $.inArray( name, includeIn ) === -1 ) {
includeIn.push( name );
}
};
var column = function ( colIdx, name, operator, matched ) {
var size, i, ien;
if ( ! operator ) {
columns[ colIdx ].includeIn.push( name );
}
else if ( operator === 'max-' ) {
// Add this breakpoint and all smaller
size = that._find( name ).width;
for ( i=0, ien=breakpoints.length ; i<ien ; i++ ) {
if ( breakpoints[i].width <= size ) {
add( colIdx, breakpoints[i].name );
}
}
}
else if ( operator === 'min-' ) {
// Add this breakpoint and all larger
size = that._find( name ).width;
for ( i=0, ien=breakpoints.length ; i<ien ; i++ ) {
if ( breakpoints[i].width >= size ) {
add( colIdx, breakpoints[i].name );
}
}
}
else if ( operator === 'not-' ) {
// Add all but this breakpoint (xxx need extra information)
for ( i=0, ien=breakpoints.length ; i<ien ; i++ ) {
if ( breakpoints[i].name.indexOf( matched ) === -1 ) {
add( colIdx, breakpoints[i].name );
}
}
}
};
// Loop over each column and determine if it has a responsive control
// class
columns.each( function ( col, i ) {
var classNames = col.className.split(' ');
var hasClass = false;
// Split the class name up so multiple rules can be applied if needed
for ( var k=0, ken=classNames.length ; k<ken ; k++ ) {
var className = $.trim( classNames[k] );
if ( className === 'all' ) {
// Include in all
hasClass = true;
col.includeIn = $.map( breakpoints, function (a) {
return a.name;
} );
return;
}
else if ( className === 'none' || className === 'never' ) {
// Include in none (default) and no auto
hasClass = true;
return;
}
else if ( className === 'control' ) {
// Special column that is only visible, when one of the other
// columns is hidden. This is used for the details control
hasClass = true;
col.control = true;
return;
}
$.each( breakpoints, function ( j, breakpoint ) {
// Does this column have a class that matches this breakpoint?
var brokenPoint = breakpoint.name.split('-');
var re = new RegExp( '(min\\-|max\\-|not\\-)?('+brokenPoint[0]+')(\\-[_a-zA-Z0-9])?' );
var match = className.match( re );
if ( match ) {
hasClass = true;
if ( match[2] === brokenPoint[0] && match[3] === '-'+brokenPoint[1] ) {
// Class name matches breakpoint name fully
column( i, breakpoint.name, match[1], match[2]+match[3] );
}
else if ( match[2] === brokenPoint[0] && ! match[3] ) {
// Class name matched primary breakpoint name with no qualifier
column( i, breakpoint.name, match[1], match[2] );
}
}
} );
}
// If there was no control class, then automatic sizing is used
if ( ! hasClass ) {
col.auto = true;
}
} );
this.s.columns = columns;
},
/**
* Initialisation for the details handler
*
* @private
*/
_detailsInit: function ()
{
var that = this;
var dt = this.s.dt;
var details = this.c.details;
// The inline type always uses the first child as the target
if ( details.type === 'inline' ) {
details.target = 'td:first-child';
}
// type.target can be a string jQuery selector or a column index
var target = details.target;
var selector = typeof target === 'string' ? target : 'td';
// Click handler to show / hide the details rows when they are available
$( dt.table().body() ).on( 'click', selector, function (e) {
// If the table is not collapsed (i.e. there is no hidden columns)
// then take no action
if ( ! $(dt.table().node()).hasClass('collapsed' ) ) {
return;
}
// Check that the row is actually a DataTable's controlled node
if ( ! dt.row( $(this).closest('tr') ).length ) {
return;
}
// For column index, we determine if we should act or not in the
// handler - otherwise it is already okay
if ( typeof target === 'number' ) {
var targetIdx = target < 0 ?
dt.columns().eq(0).length + target :
target;
if ( dt.cell( this ).index().column !== targetIdx ) {
return;
}
}
// $().closest() includes itself in its check
var row = dt.row( $(this).closest('tr') );
if ( row.child.isShown() ) {
row.child( false );
$( row.node() ).removeClass( 'parent' );
}
else {
var info = that.c.details.renderer( dt, row[0] );
row.child( info, 'child' ).show();
$( row.node() ).addClass( 'parent' );
}
} );
},
/**
* Update the child rows in the table whenever the column visibility changes
*
* @private
*/
_detailsVis: function ()
{
var that = this;
var dt = this.s.dt;
// Find how many columns are hidden
var hiddenColumns = dt.columns().indexes().filter( function ( idx ) {
var col = dt.column( idx );
if ( col.visible() ) {
return null;
}
// Only counts as hidden if it doesn't have the `never` class
return $( col.header() ).hasClass( 'never' ) ? null : idx;
} );
var haveHidden = true;
if ( hiddenColumns.length === 0 || ( hiddenColumns.length === 1 && this.s.columns[ hiddenColumns[0] ].control ) ) {
haveHidden = false;
}
if ( haveHidden ) {
// Show all existing child rows
dt.rows( { page: 'current' } ).eq(0).each( function (idx) {
var row = dt.row( idx );
if ( row.child() ) {
var info = that.c.details.renderer( dt, row[0] );
// The renderer can return false to have no child row
if ( info === false ) {
row.child.hide();
}
else {
row.child( info, 'child' ).show();
}
}
} );
}
else {
// Hide all existing child rows
dt.rows( { page: 'current' } ).eq(0).each( function (idx) {
dt.row( idx ).child.hide();
} );
}
},
/**
* Find a breakpoint object from a name
* @param {string} name Breakpoint name to find
* @return {object} Breakpoint description object
*/
_find: function ( name )
{
var breakpoints = this.c.breakpoints;
for ( var i=0, ien=breakpoints.length ; i<ien ; i++ ) {
if ( breakpoints[i].name === name ) {
return breakpoints[i];
}
}
},
/**
* Alter the table display for a resized viewport. This involves first
* determining what breakpoint the window currently is in, getting the
* column visibilities to apply and then setting them.
*
* @private
*/
_resize: function ()
{
var dt = this.s.dt;
var width = $(window).width();
var breakpoints = this.c.breakpoints;
var breakpoint = breakpoints[0].name;
var columns = this.s.columns;
var i, ien;
// Determine what breakpoint we are currently at
for ( i=breakpoints.length-1 ; i>=0 ; i-- ) {
if ( width <= breakpoints[i].width ) {
breakpoint = breakpoints[i].name;
break;
}
}
// Show the columns for that break point
var columnsVis = this._columnsVisiblity( breakpoint );
// Set the class before the column visibility is changed so event
// listeners know what the state is. Need to determine if there are
// any columns that are not visible but can be shown
var collapsedClass = false;
for ( i=0, ien=columns.length ; i<ien ; i++ ) {
if ( columnsVis[i] === false && ! columns[i].never ) {
collapsedClass = true;
break;
}
}
$( dt.table().node() ).toggleClass('collapsed', collapsedClass );
dt.columns().eq(0).each( function ( colIdx, i ) {
dt.column( colIdx ).visible( columnsVis[i] );
} );
},
/**
* Determine the width of each column in the table so the auto column hiding
* has that information to work with. This method is never going to be 100%
* perfect since column widths can change slightly per page, but without
* seriously compromising performance this is quite effective.
*
* @private
*/
_resizeAuto: function ()
{
var dt = this.s.dt;
var columns = this.s.columns;
// Are we allowed to do auto sizing?
if ( ! this.c.auto ) {
return;
}
// Are there any columns that actually need auto-sizing, or do they all
// have classes defined
if ( $.inArray( true, $.map( columns, function (c) { return c.auto; } ) ) === -1 ) {
return;
}
// Clone the table with the current data in it
var tableWidth = dt.table().node().offsetWidth;
var columnWidths = dt.columns;
var clonedTable = dt.table().node().cloneNode( false );
var clonedHeader = $( dt.table().header().cloneNode( false ) ).appendTo( clonedTable );
var clonedBody = $( dt.table().body().cloneNode( false ) ).appendTo( clonedTable );
$( dt.table().footer() ).clone( false ).appendTo( clonedTable );
// This is a bit slow, but we need to get a clone of each row that
// includes all columns. As such, try to do this as little as possible.
dt.rows( { page: 'current' } ).indexes().flatten().each( function ( idx ) {
var clone = dt.row( idx ).node().cloneNode( true );
if ( dt.columns( ':hidden' ).flatten().length ) {
$(clone).append( dt.cells( idx, ':hidden' ).nodes().to$().clone() );
}
$(clone).appendTo( clonedBody );
} );
var cells = dt.columns().header().to$().clone( false );
$('<tr/>')
.append( cells )
.appendTo( clonedHeader );
// In the inline case extra padding is applied to the first column to
// give space for the show / hide icon. We need to use this in the
// calculation
if ( this.c.details.type === 'inline' ) {
$(clonedTable).addClass( 'dtr-inline collapsed' );
}
var inserted = $('<div/>')
.css( {
width: 1,
height: 1,
overflow: 'hidden'
} )
.append( clonedTable );
// Remove columns which are not to be included
inserted.find('th.never, td.never').remove();
inserted.insertBefore( dt.table().node() );
// The cloned header now contains the smallest that each column can be
dt.columns().eq(0).each( function ( idx ) {
columns[idx].minWidth = cells[ idx ].offsetWidth || 0;
} );
inserted.remove();
}
};
/**
* List of default breakpoints. Each item in the array is an object with two
* properties:
*
* * `name` - the breakpoint name.
* * `width` - the breakpoint width
*
* @name Responsive.breakpoints
* @static
*/
Responsive.breakpoints = [
{ name: 'desktop', width: Infinity },
{ name: 'tablet-l', width: 1024 },
{ name: 'tablet-p', width: 768 },
{ name: 'mobile-l', width: 480 },
{ name: 'mobile-p', width: 320 }
];
/**
* Responsive default settings for initialisation
*
* @namespace
* @name Responsive.defaults
* @static
*/
Responsive.defaults = {
/**
* List of breakpoints for the instance. Note that this means that each
* instance can have its own breakpoints. Additionally, the breakpoints
* cannot be changed once an instance has been creased.
*
* @type {Array}
* @default Takes the value of `Responsive.breakpoints`
*/
breakpoints: Responsive.breakpoints,
/**
* Enable / disable auto hiding calculations. It can help to increase
* performance slightly if you disable this option, but all columns would
* need to have breakpoint classes assigned to them
*
* @type {Boolean}
* @default `true`
*/
auto: true,
/**
* Details control. If given as a string value, the `type` property of the
* default object is set to that value, and the defaults used for the rest
* of the object - this is for ease of implementation.
*
* The object consists of the following properties:
*
* * `renderer` - function that is called for display of the child row data.
* The default function will show the data from the hidden columns
* * `target` - Used as the selector for what objects to attach the child
* open / close to
* * `type` - `false` to disable the details display, `inline` or `column`
* for the two control types
*
* @type {Object|string}
*/
details: {
renderer: function ( api, rowIdx ) {
var data = api.cells( rowIdx, ':hidden' ).eq(0).map( function ( cell ) {
var header = $( api.column( cell.column ).header() );
var idx = api.cell( cell ).index();
if ( header.hasClass( 'control' ) || header.hasClass( 'never' ) ) {
return '';
}
// Use a non-public DT API method to render the data for display
// This needs to be updated when DT adds a suitable method for
// this type of data retrieval
var dtPrivate = api.settings()[0];
var cellData = dtPrivate.oApi._fnGetCellData(
dtPrivate, idx.row, idx.column, 'display'
);
var title = header.text();
if ( title ) {
title = title + ':';
}
return '<li data-dtr-index="'+idx.column+'">'+
'<span class="dtr-title">'+
title+
'</span> '+
'<span class="dtr-data">'+
cellData+
'</span>'+
'</li>';
} ).toArray().join('');
return data ?
$('<ul data-dtr-index="'+rowIdx+'"/>').append( data ) :
false;
},
target: 0,
type: 'inline'
}
};
/*
* API
*/
var Api = $.fn.dataTable.Api;
// Doesn't do anything - work around for a bug in DT... Not documented
Api.register( 'responsive()', function () {
return this;
} );
Api.register( 'responsive.index()', function ( li ) {
li = $(li);
return {
column: li.data('dtr-index'),
row: li.parent().data('dtr-index')
};
} );
Api.register( 'responsive.rebuild()', function () {
return this.iterator( 'table', function ( ctx ) {
if ( ctx._responsive ) {
ctx._responsive._classLogic();
}
} );
} );
Api.register( 'responsive.recalc()', function () {
return this.iterator( 'table', function ( ctx ) {
if ( ctx._responsive ) {
ctx._responsive._resizeAuto();
ctx._responsive._resize();
}
} );
} );
/**
* Version information
*
* @name Responsive.version
* @static
*/
Responsive.version = '1.0.6';
$.fn.dataTable.Responsive = Responsive;
$.fn.DataTable.Responsive = Responsive;
// Attach a listener to the document which listens for DataTables initialisation
// events so we can automatically initialise
$(document).on( 'init.dt.dtr', function (e, settings, json) {
if ( e.namespace !== 'dt' ) {
return;
}
if ( $(settings.nTable).hasClass( 'responsive' ) ||
$(settings.nTable).hasClass( 'dt-responsive' ) ||
settings.oInit.responsive ||
DataTable.defaults.responsive
) {
var init = settings.oInit.responsive;
if ( init !== false ) {
new Responsive( settings, $.isPlainObject( init ) ? init : {} );
}
}
} );
return Responsive;
}; // /factory
// Define as an AMD module if possible
if ( typeof define === 'function' && define.amd ) {
define( ['jquery', 'datatables'], factory );
}
else if ( typeof exports === 'object' ) {
// Node/CommonJS
factory( require('jquery'), require('datatables') );
}
else if ( jQuery && !jQuery.fn.dataTable.Responsive ) {
// Otherwise simply initialise as normal, stopping multiple evaluation
factory( jQuery, jQuery.fn.dataTable );
}
})(window, document);

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static/feedback.js

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// submitting form with modal:
// https://stackoverflow.com/a/29068742
//
// closing a bootstrap modal with submit button:
// https://stackoverflow.com/a/33478107
//
// flask post data as json:
// https://stackoverflow.com/a/16664376
/* this function is called when the user submits
* the feedback form. it submits a post request
* to the flask server, which squirrels away the
* feedback in a file.
*/
function submit_feedback() {
// this function is called when submit button clicked
// algorithm:
// - check if text box has content
// - check if happy/sad filled out
var smile_active = $('#modal-feedback-smile-div').hasClass('smile-active');
var frown_active = $('#modal-feedback-frown-div').hasClass('frown-active');
if( !( smile_active || frown_active ) ) {
alert('Please pick the smile or the frown.')
} else if( $('#modal-feedback-textarea').val()=='' ) {
alert('Please provide us with some feedback.')
} else {
var user_sentiment = '';
if(smile_active) {
user_sentiment = 'smile';
} else {
user_sentiment = 'frown';
}
var escaped_text = $('#modal-feedback-textarea').val();
// prepare form data
var data = {
sentiment : user_sentiment,
content : escaped_text
};
// post the form. the callback function resets the form
$.post("/feedback",
data,
function(response) {
$('#myModal').modal('hide');
$('#myModalForm')[0].reset();
add_alert(response);
frown_unclick();
smile_unclick();
});
}
}
function add_alert(response) {
str = ""
str += '<div id="feedback-messages-container" class="container">';
if (response['status']=='ok') {
// if status is ok, use alert-success
str += ' <div id="feedback-messages-alert" class="alert alert-success alert-dismissible fade in">';
} else {
// otherwise use alert-danger
str += ' <div id="feedback-messages-alert" class="alert alert-danger alert-dismissible fade in">';
}
str += ' <a href="#" class="close" data-dismiss="alert" aria-label="close">&times;</a>';
str += ' <div id="feedback-messages-contianer" class="container-fluid">';
str += ' <div id="feedback-messages-div" class="co-xs-12">';
str += ' <p>'
str += response['message'];
str += ' </p>';
str += ' </div>';
str += ' </div>';
str += '</div>';
$('div#messages').append(str);
}
/* for those particularly wordy users... limit feedback to 1000 chars */
function cool_it() {
if($('#modal-feedback-textarea').val().length > 1100 ){
$('#modal-too-long').show();
} else {
$('#modal-too-long').hide();
}
}
/* smiley functions */
function smile_click() {
$('#modal-feedback-smile-div').addClass('smile-active');
$('#modal-feedback-smile-icon').addClass('smile-active');
}
function frown_click() {
$('#modal-feedback-frown-div').addClass('frown-active');
$('#modal-feedback-frown-icon').addClass('frown-active');
}
function smile_unclick() {
$('#modal-feedback-smile-div').removeClass('smile-active');
$('#modal-feedback-smile-icon').removeClass('smile-active');
}
function frown_unclick() {
$('#modal-feedback-frown-div').removeClass('frown-active');
$('#modal-feedback-frown-icon').removeClass('frown-active');
}
function smile() {
frown_unclick();
smile_click();
}
function frown() {
smile_unclick();
frown_click();
}
/* for those particularly wordy users... limit feedback to 1100 chars */
// how to check n characters in a textarea
// https://stackoverflow.com/a/19934613
/*
$(document).ready(function() {
$('#modal-feedback-textarea').on('change',function(event) {
if($('#modal-feedback-textarea').val().length > 1100 ){
$('#modal-too-long').show();
} else {
$('#modal-too-long').hide();
}
});
}
*/

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static/jquery.dataTables.min.js vendored

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/*!
DataTables 1.10.12
©2008-2015 SpryMedia Ltd - datatables.net/license
*/
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b,c,d){return this.iterator("column",function(e,f){var g=e.aoPreSearchCols;if(a===k)return g[f].sSearch;e.oFeatures.bFilter&&(h.extend(g[f],{sSearch:a+"",bRegex:null===b?!1:b,bSmart:null===c?!0:c,bCaseInsensitive:null===d?!0:d}),fa(e,e.oPreviousSearch,1))})});p("state()",function(){return this.context.length?this.context[0].oSavedState:null});p("state.clear()",function(){return this.iterator("table",function(a){a.fnStateSaveCallback.call(a.oInstance,a,{})})});p("state.loaded()",function(){return this.context.length?
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sSearch:"",bRegex:!1,bSmart:!0};m.models.oRow={nTr:null,anCells:null,_aData:[],_aSortData:null,_aFilterData:null,_sFilterRow:null,_sRowStripe:"",src:null,idx:-1};m.models.oColumn={idx:null,aDataSort:null,asSorting:null,bSearchable:null,bSortable:null,bVisible:null,_sManualType:null,_bAttrSrc:!1,fnCreatedCell:null,fnGetData:null,fnSetData:null,mData:null,mRender:null,nTh:null,nTf:null,sClass:null,sContentPadding:null,sDefaultContent:null,sName:null,sSortDataType:"std",sSortingClass:null,sSortingClassJUI:null,
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bSort:null,bSortMulti:null,bSortClasses:null,bStateSave:null},oScroll:{bCollapse:null,iBarWidth:0,sX:null,sXInner:null,sY:null},oLanguage:{fnInfoCallback:null},oBrowser:{bScrollOversize:!1,bScrollbarLeft:!1,bBounding:!1,barWidth:0},ajax:null,aanFeatures:[],aoData:[],aiDisplay:[],aiDisplayMaster:[],aIds:{},aoColumns:[],aoHeader:[],aoFooter:[],oPreviousSearch:{},aoPreSearchCols:[],aaSorting:null,aaSortingFixed:[],asStripeClasses:null,asDestroyStripes:[],sDestroyWidth:0,aoRowCallback:[],aoHeaderCallback:[],
aoFooterCallback:[],aoDrawCallback:[],aoRowCreatedCallback:[],aoPreDrawCallback:[],aoInitComplete:[],aoStateSaveParams:[],aoStateLoadParams:[],aoStateLoaded:[],sTableId:"",nTable:null,nTHead:null,nTFoot:null,nTBody:null,nTableWrapper:null,bDeferLoading:!1,bInitialised:!1,aoOpenRows:[],sDom:null,searchDelay:null,sPaginationType:"two_button",iStateDuration:0,aoStateSave:[],aoStateLoad:[],oSavedState:null,oLoadedState:null,sAjaxSource:null,sAjaxDataProp:null,bAjaxDataGet:!0,jqXHR:null,json:k,oAjaxData:k,
fnServerData:null,aoServerParams:[],sServerMethod:null,fnFormatNumber:null,aLengthMenu:null,iDraw:0,bDrawing:!1,iDrawError:-1,_iDisplayLength:10,_iDisplayStart:0,_iRecordsTotal:0,_iRecordsDisplay:0,bJUI:null,oClasses:{},bFiltered:!1,bSorted:!1,bSortCellsTop:null,oInit:null,aoDestroyCallback:[],fnRecordsTotal:function(){return"ssp"==y(this)?1*this._iRecordsTotal:this.aiDisplayMaster.length},fnRecordsDisplay:function(){return"ssp"==y(this)?1*this._iRecordsDisplay:this.aiDisplay.length},fnDisplayEnd:function(){var a=
this._iDisplayLength,b=this._iDisplayStart,c=b+a,d=this.aiDisplay.length,e=this.oFeatures,f=e.bPaginate;return e.bServerSide?!1===f||-1===a?b+d:Math.min(b+a,this._iRecordsDisplay):!f||c>d||-1===a?d:c},oInstance:null,sInstance:null,iTabIndex:0,nScrollHead:null,nScrollFoot:null,aLastSort:[],oPlugins:{},rowIdFn:null,rowId:null};m.ext=v={buttons:{},classes:{},builder:"-source-",errMode:"alert",feature:[],search:[],selector:{cell:[],column:[],row:[]},internal:{},legacy:{ajax:null},pager:{},renderer:{pageButton:{},
header:{}},order:{},type:{detect:[],search:{},order:{}},_unique:0,fnVersionCheck:m.fnVersionCheck,iApiIndex:0,oJUIClasses:{},sVersion:m.version};h.extend(v,{afnFiltering:v.search,aTypes:v.type.detect,ofnSearch:v.type.search,oSort:v.type.order,afnSortData:v.order,aoFeatures:v.feature,oApi:v.internal,oStdClasses:v.classes,oPagination:v.pager});h.extend(m.ext.classes,{sTable:"dataTable",sNoFooter:"no-footer",sPageButton:"paginate_button",sPageButtonActive:"current",sPageButtonDisabled:"disabled",sStripeOdd:"odd",
sStripeEven:"even",sRowEmpty:"dataTables_empty",sWrapper:"dataTables_wrapper",sFilter:"dataTables_filter",sInfo:"dataTables_info",sPaging:"dataTables_paginate paging_",sLength:"dataTables_length",sProcessing:"dataTables_processing",sSortAsc:"sorting_asc",sSortDesc:"sorting_desc",sSortable:"sorting",sSortableAsc:"sorting_asc_disabled",sSortableDesc:"sorting_desc_disabled",sSortableNone:"sorting_disabled",sSortColumn:"sorting_",sFilterInput:"",sLengthSelect:"",sScrollWrapper:"dataTables_scroll",sScrollHead:"dataTables_scrollHead",
sScrollHeadInner:"dataTables_scrollHeadInner",sScrollBody:"dataTables_scrollBody",sScrollFoot:"dataTables_scrollFoot",sScrollFootInner:"dataTables_scrollFootInner",sHeaderTH:"",sFooterTH:"",sSortJUIAsc:"",sSortJUIDesc:"",sSortJUI:"",sSortJUIAscAllowed:"",sSortJUIDescAllowed:"",sSortJUIWrapper:"",sSortIcon:"",sJUIHeader:"",sJUIFooter:""});var Ca="",Ca="",H=Ca+"ui-state-default",ia=Ca+"css_right ui-icon ui-icon-",Xb=Ca+"fg-toolbar ui-toolbar ui-widget-header ui-helper-clearfix";h.extend(m.ext.oJUIClasses,
m.ext.classes,{sPageButton:"fg-button ui-button "+H,sPageButtonActive:"ui-state-disabled",sPageButtonDisabled:"ui-state-disabled",sPaging:"dataTables_paginate fg-buttonset ui-buttonset fg-buttonset-multi ui-buttonset-multi paging_",sSortAsc:H+" sorting_asc",sSortDesc:H+" sorting_desc",sSortable:H+" sorting",sSortableAsc:H+" sorting_asc_disabled",sSortableDesc:H+" sorting_desc_disabled",sSortableNone:H+" sorting_disabled",sSortJUIAsc:ia+"triangle-1-n",sSortJUIDesc:ia+"triangle-1-s",sSortJUI:ia+"carat-2-n-s",
sSortJUIAscAllowed:ia+"carat-1-n",sSortJUIDescAllowed:ia+"carat-1-s",sSortJUIWrapper:"DataTables_sort_wrapper",sSortIcon:"DataTables_sort_icon",sScrollHead:"dataTables_scrollHead "+H,sScrollFoot:"dataTables_scrollFoot "+H,sHeaderTH:H,sFooterTH:H,sJUIHeader:Xb+" ui-corner-tl ui-corner-tr",sJUIFooter:Xb+" ui-corner-bl ui-corner-br"});var Mb=m.ext.pager;h.extend(Mb,{simple:function(){return["previous","next"]},full:function(){return["first","previous","next","last"]},numbers:function(a,b){return[ya(a,
b)]},simple_numbers:function(a,b){return["previous",ya(a,b),"next"]},full_numbers:function(a,b){return["first","previous",ya(a,b),"next","last"]},_numbers:ya,numbers_length:7});h.extend(!0,m.ext.renderer,{pageButton:{_:function(a,b,c,d,e,f){var g=a.oClasses,j=a.oLanguage.oPaginate,i=a.oLanguage.oAria.paginate||{},k,l,m=0,p=function(b,d){var o,r,u,s,v=function(b){Ta(a,b.data.action,true)};o=0;for(r=d.length;o<r;o++){s=d[o];if(h.isArray(s)){u=h("<"+(s.DT_el||"div")+"/>").appendTo(b);p(u,s)}else{k=null;
l="";switch(s){case "ellipsis":b.append('<span class="ellipsis">&#x2026;</span>');break;case "first":k=j.sFirst;l=s+(e>0?"":" "+g.sPageButtonDisabled);break;case "previous":k=j.sPrevious;l=s+(e>0?"":" "+g.sPageButtonDisabled);break;case "next":k=j.sNext;l=s+(e<f-1?"":" "+g.sPageButtonDisabled);break;case "last":k=j.sLast;l=s+(e<f-1?"":" "+g.sPageButtonDisabled);break;default:k=s+1;l=e===s?g.sPageButtonActive:""}if(k!==null){u=h("<a>",{"class":g.sPageButton+" "+l,"aria-controls":a.sTableId,"aria-label":i[s],
"data-dt-idx":m,tabindex:a.iTabIndex,id:c===0&&typeof s==="string"?a.sTableId+"_"+s:null}).html(k).appendTo(b);Wa(u,{action:s},v);m++}}}},r;try{r=h(b).find(I.activeElement).data("dt-idx")}catch(o){}p(h(b).empty(),d);r&&h(b).find("[data-dt-idx="+r+"]").focus()}}});h.extend(m.ext.type.detect,[function(a,b){var c=b.oLanguage.sDecimal;return Za(a,c)?"num"+c:null},function(a){if(a&&!(a instanceof Date)&&(!ac.test(a)||!bc.test(a)))return null;var b=Date.parse(a);return null!==b&&!isNaN(b)||M(a)?"date":
null},function(a,b){var c=b.oLanguage.sDecimal;return Za(a,c,!0)?"num-fmt"+c:null},function(a,b){var c=b.oLanguage.sDecimal;return Rb(a,c)?"html-num"+c:null},function(a,b){var c=b.oLanguage.sDecimal;return Rb(a,c,!0)?"html-num-fmt"+c:null},function(a){return M(a)||"string"===typeof a&&-1!==a.indexOf("<")?"html":null}]);h.extend(m.ext.type.search,{html:function(a){return M(a)?a:"string"===typeof a?a.replace(Ob," ").replace(Aa,""):""},string:function(a){return M(a)?a:"string"===typeof a?a.replace(Ob,
" "):a}});var za=function(a,b,c,d){if(0!==a&&(!a||"-"===a))return-Infinity;b&&(a=Qb(a,b));a.replace&&(c&&(a=a.replace(c,"")),d&&(a=a.replace(d,"")));return 1*a};h.extend(v.type.order,{"date-pre":function(a){return Date.parse(a)||0},"html-pre":function(a){return M(a)?"":a.replace?a.replace(/<.*?>/g,"").toLowerCase():a+""},"string-pre":function(a){return M(a)?"":"string"===typeof a?a.toLowerCase():!a.toString?"":a.toString()},"string-asc":function(a,b){return a<b?-1:a>b?1:0},"string-desc":function(a,
b){return a<b?1:a>b?-1:0}});db("");h.extend(!0,m.ext.renderer,{header:{_:function(a,b,c,d){h(a.nTable).on("order.dt.DT",function(e,f,g,h){if(a===f){e=c.idx;b.removeClass(c.sSortingClass+" "+d.sSortAsc+" "+d.sSortDesc).addClass(h[e]=="asc"?d.sSortAsc:h[e]=="desc"?d.sSortDesc:c.sSortingClass)}})},jqueryui:function(a,b,c,d){h("<div/>").addClass(d.sSortJUIWrapper).append(b.contents()).append(h("<span/>").addClass(d.sSortIcon+" "+c.sSortingClassJUI)).appendTo(b);h(a.nTable).on("order.dt.DT",function(e,
f,g,h){if(a===f){e=c.idx;b.removeClass(d.sSortAsc+" "+d.sSortDesc).addClass(h[e]=="asc"?d.sSortAsc:h[e]=="desc"?d.sSortDesc:c.sSortingClass);b.find("span."+d.sSortIcon).removeClass(d.sSortJUIAsc+" "+d.sSortJUIDesc+" "+d.sSortJUI+" "+d.sSortJUIAscAllowed+" "+d.sSortJUIDescAllowed).addClass(h[e]=="asc"?d.sSortJUIAsc:h[e]=="desc"?d.sSortJUIDesc:c.sSortingClassJUI)}})}}});var Yb=function(a){return"string"===typeof a?a.replace(/</g,"&lt;").replace(/>/g,"&gt;").replace(/"/g,"&quot;"):a};m.render={number:function(a,
b,c,d,e){return{display:function(f){if("number"!==typeof f&&"string"!==typeof f)return f;var g=0>f?"-":"",h=parseFloat(f);if(isNaN(h))return Yb(f);f=Math.abs(h);h=parseInt(f,10);f=c?b+(f-h).toFixed(c).substring(2):"";return g+(d||"")+h.toString().replace(/\B(?=(\d{3})+(?!\d))/g,a)+f+(e||"")}}},text:function(){return{display:Yb}}};h.extend(m.ext.internal,{_fnExternApiFunc:Nb,_fnBuildAjax:ra,_fnAjaxUpdate:lb,_fnAjaxParameters:ub,_fnAjaxUpdateDraw:vb,_fnAjaxDataSrc:sa,_fnAddColumn:Ea,_fnColumnOptions:ja,
_fnAdjustColumnSizing:Y,_fnVisibleToColumnIndex:Z,_fnColumnIndexToVisible:$,_fnVisbleColumns:aa,_fnGetColumns:la,_fnColumnTypes:Ga,_fnApplyColumnDefs:ib,_fnHungarianMap:X,_fnCamelToHungarian:K,_fnLanguageCompat:Da,_fnBrowserDetect:gb,_fnAddData:N,_fnAddTr:ma,_fnNodeToDataIndex:function(a,b){return b._DT_RowIndex!==k?b._DT_RowIndex:null},_fnNodeToColumnIndex:function(a,b,c){return h.inArray(c,a.aoData[b].anCells)},_fnGetCellData:B,_fnSetCellData:jb,_fnSplitObjNotation:Ja,_fnGetObjectDataFn:Q,_fnSetObjectDataFn:R,
_fnGetDataMaster:Ka,_fnClearTable:na,_fnDeleteIndex:oa,_fnInvalidate:ca,_fnGetRowElements:Ia,_fnCreateTr:Ha,_fnBuildHead:kb,_fnDrawHead:ea,_fnDraw:O,_fnReDraw:T,_fnAddOptionsHtml:nb,_fnDetectHeader:da,_fnGetUniqueThs:qa,_fnFeatureHtmlFilter:pb,_fnFilterComplete:fa,_fnFilterCustom:yb,_fnFilterColumn:xb,_fnFilter:wb,_fnFilterCreateSearch:Pa,_fnEscapeRegex:Qa,_fnFilterData:zb,_fnFeatureHtmlInfo:sb,_fnUpdateInfo:Cb,_fnInfoMacros:Db,_fnInitialise:ga,_fnInitComplete:ta,_fnLengthChange:Ra,_fnFeatureHtmlLength:ob,
_fnFeatureHtmlPaginate:tb,_fnPageChange:Ta,_fnFeatureHtmlProcessing:qb,_fnProcessingDisplay:C,_fnFeatureHtmlTable:rb,_fnScrollDraw:ka,_fnApplyToChildren:J,_fnCalculateColumnWidths:Fa,_fnThrottle:Oa,_fnConvertToWidth:Fb,_fnGetWidestNode:Gb,_fnGetMaxLenString:Hb,_fnStringToCss:x,_fnSortFlatten:V,_fnSort:mb,_fnSortAria:Jb,_fnSortListener:Va,_fnSortAttachListener:Ma,_fnSortingClasses:va,_fnSortData:Ib,_fnSaveState:wa,_fnLoadState:Kb,_fnSettingsFromNode:xa,_fnLog:L,_fnMap:E,_fnBindAction:Wa,_fnCallbackReg:z,
_fnCallbackFire:u,_fnLengthOverflow:Sa,_fnRenderer:Na,_fnDataSource:y,_fnRowAttributes:La,_fnCalculateEnd:function(){}});h.fn.dataTable=m;m.$=h;h.fn.dataTableSettings=m.settings;h.fn.dataTableExt=m.ext;h.fn.DataTable=function(a){return h(this).dataTable(a).api()};h.each(m,function(a,b){h.fn.DataTable[a]=b});return h.fn.dataTable});

402
static/master_list.js

@ -0,0 +1,402 @@ @@ -0,0 +1,402 @@
//////////////////////////////////
// Centillion Master List
// Javascript Functions
//
// This file contains javascript functions used by
// the master_list page of centillion. The master
// list page uses the search engine as an API to
// get a list of all documents by type.
///////////////////////////////////
// Process get parameters
//
// When the document is loaded, parse the GET params
// from the URL (everything after the ?).
//
// If the "doctype" parameter is in the URL, use it to
// determine which panel to open automatically.
var initGdocTable = false;
var initIssuesTable = false;
var initGhfilesTable = false;
var initMarkdownTable = false;
var initEmailthreadsTable = false;
var initDisqusTable = false;
$(document).ready(function() {
var url_string = document.location.toString();
var url = new URL(url_string);
var d = url.searchParams.get("doctype");
if (d==='gdoc') {
load_gdoc_table();
var divList = $('div#collapseDrive').addClass('in');
} else if (d==='issue') {
load_issue_table();
var divList = $('div#collapseIssues').addClass('in');
} else if (d==='ghfile') {
load_ghfile_table();
var divList = $('div#collapseFiles').addClass('in');
} else if (d==='markdown') {
load_markdown_table();
var divList = $('div#collapseMarkdown').addClass('in');
} else if (d==='emailthread') {
load_emailthreads_table();
var divList = $('div#collapseThreads').addClass('in');
} else if (d==='disqus') {
load_disqusthreads_table();
var divList = $('div#collapseDisqus').addClass('in');
}
});
//////////////////////////////////
// API-to-Table Functions
//
// These functions ask centillion for a list of all documents
// of a given type, and load the results into an HTML table.
//
// The dataTable bootstrap plugin is used to make the tables
// sortable, searchable, and slick.
//
// Sections:
// ----------
// Google Drive files
// Github issues
// Github files
// Github markdown
// Groups.io email threads
// ------------------------
// Google Drive
function load_gdoc_table(){
if(!initGdocTable) {
var divList = $('div#collapseDrive').attr('class');
if (divList.indexOf('in') !== -1) {
//console.log('Closing Google Drive master list');
} else {
//console.log('Opening Google Drive master list');
$.getJSON("/list/gdoc", function(result){
var r = new Array(), j = -1, size=result.length;
r[++j] = '<thead>'
r[++j] = '<tr class="header-row">';
r[++j] = '<th width="40%">File Name</th>';
r[++j] = '<th width="15%">Owner</th>';
r[++j] = '<th width="15%">Type</th>';
r[++j] = '<th width="15%">Created</th>';
r[++j] = '<th width="15%">Modified</th>';
r[++j] = '</tr>';
r[++j] = '</thead>'
r[++j] = '<tbody>'
for (var i=0; i<size; i++){
r[++j] = '<tr><td>';
r[++j] = '<a href="' + result[i]['url'] + '" target="_blank">'
r[++j] = result[i]['title'];
r[++j] = '</a>'
r[++j] = '</td><td>';
r[++j] = result[i]['owner_name'];
r[++j] = '</td><td>';
r[++j] = result[i]['mimetype'];
r[++j] = '</td><td>';
r[++j] = result[i]['created_time'];
r[++j] = '</td><td>';
r[++j] = result[i]['modified_time'];
r[++j] = '</td></tr>';
}
r[++j] = '</tbody>'
// Construct names of id tags
var doctype = 'gdocs';
var idlabel = '#' + doctype + '-master-list';
var filtlabel = idlabel + '_filter';
// Initialize the DataTable
$(idlabel).html(r.join(''));
$(idlabel).DataTable({
responsive: true,
lengthMenu: [50,100,250,500]
});
initGdocTable = true
});
//console.log('Finished loading Google Drive master list');
}
}
}
// ------------------------
// Github issues
function load_issue_table(){
if(!initIssuesTable) {
var divList = $('div#collapseIssues').attr('class');
if (divList.indexOf('in') !== -1) {
//console.log('Closing Github issues master list');
} else {
//console.log('Opening Github issues master list');
$.getJSON("/list/issue", function(result){
var r = new Array(), j = -1, size=result.length;
r[++j] = '<thead>'
r[++j] = '<tr class="header-row">';
r[++j] = '<th width="50%">Issue Name</th>';
r[++j] = '<th width="15%">Repository</th>';
r[++j] = '<th width="15%">Created</th>';
r[++j] = '<th width="15%">Modified</th>';
r[++j] = '</tr>';
r[++j] = '</thead>'
r[++j] = '<tbody>'
for (var i=0; i<size; i++){
r[++j] ='<tr><td>';
r[++j] = '<a href="' + result[i]['url'] + '" target="_blank">'
r[++j] = result[i]['title'];
r[++j] = '</a>'
r[++j] = '</td><td>';
r[++j] = '<a href="' + result[i]['repo_url'] + '" target="_blank">'
r[++j] = result[i]['repo_name'];
r[++j] = '</a>'
r[++j] = '</td><td>';
r[++j] = result[i]['created_time'];
r[++j] = '</td><td>';
r[++j] = result[i]['modified_time'];
r[++j] = '</td></tr>';
}
r[++j] = '</tbody>'
// Construct names of id tags
var doctype = 'issues';
var idlabel = '#' + doctype + '-master-list';
var filtlabel = idlabel + '_filter';
// Initialize the DataTable
$(idlabel).html(r.join(''));
$(idlabel).DataTable({
responsive: true,
lengthMenu: [50,100,250,500]
});
initIssuesTable = true;
});
//console.log('Finished loading Github issues master list');
}
}
}
// ------------------------
// Github files
function load_ghfile_table(){
if(!initGhfilesTable) {
var divList = $('div#collapseFiles').attr('class');
if (divList.indexOf('in') !== -1) {
//console.log('Closing Github files master list');
} else {
//console.log('Opening Github files master list');
$.getJSON("/list/ghfile", function(result){
//console.log("-----------");
//console.log(result);
var r = new Array(), j = -1, size=result.length;
r[++j] = '<thead>'
r[++j] = '<tr class="header-row">';
r[++j] = '<th width="70%">File Name</th>';
r[++j] = '<th width="30%">Repository</th>';
r[++j] = '</tr>';
r[++j] = '</thead>'
r[++j] = '<tbody>'
for (var i=0; i<size; i++){
r[++j] ='<tr><td>';
r[++j] = '<a href="' + result[i]['url'] + '" target="_blank">'
r[++j] = result[i]['title'];
r[++j] = '</a>'
r[++j] = '</td><td>';
r[++j] = '<a href="' + result[i]['repo_url'] + '" target="_blank">'
r[++j] = result[i]['repo_name'];
r[++j] = '</a>'
r[++j] = '</td></tr>';
}
r[++j] = '</tbody>'
// Construct names of id tags
var doctype = 'ghfiles';
var idlabel = '#' + doctype + '-master-list';
var filtlabel = idlabel + '_filter';
// Initialize the DataTable
$(idlabel).html(r.join(''));
$(idlabel).DataTable({
responsive: true,
lengthMenu: [50,100,250,500]
});
initGhfilesTable = true;
});
//console.log('Finished loading Github file list');
}
}
}
// ------------------------
// Github Markdown
function load_markdown_table(){
if(!initMarkdownTable) {
var divList = $('div#collapseMarkdown').attr('class');
if (divList.indexOf('in') !== -1) {
//console.log('Closing Github markdown master list');
} else {
//console.log('Opening Github markdown master list');
$.getJSON("/list/markdown", function(result){
var r = new Array(), j = -1, size=result.length;
r[++j] = '<thead>'
r[++j] = '<tr class="header-row">';
r[++j] = '<th width="70%">Markdown File Name</th>';
r[++j] = '<th width="30%">Repository</th>';
r[++j] = '</tr>';
r[++j] = '</thead>'
r[++j] = '<tbody>'
for (var i=0; i<size; i++){
r[++j] ='<tr><td>';
r[++j] = '<a href="' + result[i]['url'] + '" target="_blank">'
r[++j] = result[i]['title'];
r[++j] = '</a>'
r[++j] = '</td><td>';
r[++j] = '<a href="' + result[i]['repo_url'] + '" target="_blank">'
r[++j] = result[i]['repo_name'];
r[++j] = '</a>'
r[++j] = '</td></tr>';
}
r[++j] = '</tbody>'
// Construct names of id tags
var doctype = 'markdown';
var idlabel = '#' + doctype + '-master-list';
var filtlabel = idlabel + '_filter';
// Initialize the DataTable
$(idlabel).html(r.join(''));
$(idlabel).DataTable({
responsive: true,
lengthMenu: [50,100,250,500]
});
initMarkdownTable = true;
});
//console.log('Finished loading Markdown list');
}
}
}
// ------------------------
// Groups.io Email Threads
function load_emailthreads_table(){
if(!initEmailthreadsTable) {
var divList = $('div#collapseThreads').attr('class');
if (divList.indexOf('in') !== -1) {
//console.log('Closing Groups.io email threads master list');
} else {
//console.log('Opening Groups.io email threads master list');
$.getJSON("/list/emailthread", function(result){
var r = new Array(), j = -1, size=result.length;
r[++j] = '<thead>'
r[++j] = '<tr class="header-row">';
r[++j] = '<th width="70%">Topic</th>';
r[++j] = '<th width="30%">Started By</th>';
r[++j] = '</tr>';
r[++j] = '</thead>'
r[++j] = '<tbody>'
for (var i=0; i<size; i++){
r[++j] ='<tr><td>';
r[++j] = '<a href="' + result[i]['url'] + '" target="_blank">'
r[++j] = result[i]['title'];
r[++j] = '</a>'
r[++j] = '</td><td>';
r[++j] = result[i]['owner_name'];
r[++j] = '</td></tr>';
}
r[++j] = '</tbody>'
// Construct names of id tags
var doctype = 'emailthreads';
var idlabel = '#' + doctype + '-master-list';
var filtlabel = idlabel + '_filter';
// Initialize the DataTable
$(idlabel).html(r.join(''));
$(idlabel).DataTable({
responsive: true,
lengthMenu: [50,100,250,500]
});
initEmailthreadsTable = true;
});
//console.log('Finished loading Groups.io email threads list');
}
}
}
// ------------------------
// Disqus Comment Threads
function load_disqusthreads_table(){
if(!initEmailthreadsTable) {
var divList = $('div#collapseDisqus').attr('class');
if (divList.indexOf('in') !== -1) {
//console.log('Closing Disqus comment threads master list');
} else {
//console.log('Opening Disqus comment threads master list');
$.getJSON("/list/disqus", function(result){
var r = new Array(), j = -1, size=result.length;
r[++j] = '<thead>'
r[++j] = '<tr class="header-row">';
r[++j] = '<th width="70%">Page Title</th>';
r[++j] = '<th width="30%">Created</th>';
r[++j] = '</tr>';
r[++j] = '</thead>'
r[++j] = '<tbody>'
for (var i=0; i<size; i++){
r[++j] ='<tr><td>';
r[++j] = '<a href="' + result[i]['url'] + '" target="_blank">'
r[++j] = result[i]['title'];
r[++j] = '</a>'
r[++j] = '</td><td>';
r[++j] = result[i]['created_time'];
r[++j] = '</td></tr>';
}
r[++j] = '</tbody>'
// Construct names of id tags
var doctype = 'disqus';
var idlabel = '#' + doctype + '-master-list';
var filtlabel = idlabel + '_filter';
// Initialize the DataTable
$(idlabel).html(r.join(''));
$(idlabel).DataTable({
responsive: true,
lengthMenu: [50,100,250,500]
});
initDisqusTable = true;
});
console.log('Finished loading Disqus comment threads list');
}
}
}

39
static/search_list.js

@ -0,0 +1,39 @@ @@ -0,0 +1,39 @@
//////////////////////////////////
// Centillion Search Results Listing
// Javascript Functions
//
// This file contains javascript functions used by
// the search results page centillion.
//////////////////////////////////
// Results-to-DataTable Functions
//
// These functions post-process the table of search results
// and make it into a dataTable.
//
// The dataTable bootstrap plugin is used to make the tables
// sortable, searchable, and slick.
$(document).ready(function() {
// Construct names of id tags
table_id = "#search-results";
// Initialize the DataTable
$(table_id).DataTable({
responsive: true,
searching: false,
order: [[0,'desc']],
aoColumnDefs: [
{ bSortable: false,
aTargets : [2]
}
],
lengthMenu: [10,20,50,100]
});
console.log('Finished loading search results list');
});

92
static/style.css

@ -1,3 +1,91 @@ @@ -1,3 +1,91 @@
#modal-too-long {
visibility: hidden;
}
/* feedback smileys */
#modal-feedback-smile-icon,
#modal-feedback-frown-icon {
padding-left: 100px;
padding-right: 100px;
padding-top: 20px;
padding-bottom: 20px;
}
div.smile-active {
background-color: #2b2;
}
i.smile-active {
color: #fff;
}
div.frown-active {
background-color: #b22;
}
i.frown-active {
color: #fff;
}
/* feedback text area */
#modal-feedback-textarea {
width: 100%;
}
/* feedback buttons */
button.close {
font-size: 35px;
}
button#submit-feedback-btn {
width: 250px;
}
button#feedback:hover {
opacity: 1.0;
filter: alpha(opacity=100); /* For IE8 and earlier */
}
button#feedback {
opacity: 0.5;
filter: alpha(opacity=50); /* For IE8 and earlier */
width: 180px;
height: 50px;
position: fixed;
z-index: 999;
right: 120px;
bottom: 10px;
}
/* search results table */
td#search-results-score-col,
td#search-results-type-col {
width: 100px;
}
div.container {
width: 90%;
}
/* control panel button width */
.btn-reindex-type, .btn-reindex-all {
width: 350px;
}
/* landing page github button */
#github-button {
display:inline-block;
font-size: 20px;
line-height: 40px;
padding: 10px 40px 10px 40px;
text-align: center;
}
/* search button */
#the-big-one {
margin-top: 10px;
margin-bottom: 10px;
}
/* badges for number of docs indexed */
span.badge {
vertical-align: text-bottom;
}
@ -7,6 +95,10 @@ a.badgelinks, a.badgelinks:hover { @@ -7,6 +95,10 @@ a.badgelinks, a.badgelinks:hover {
text-decoration: none;
}
h2.masterlist-header a {
text-decoration: none;
}
div.list-group {
border: 1px solid rgba(86,61,124,.2);
}

26
templates/403.html

@ -0,0 +1,26 @@ @@ -0,0 +1,26 @@
{% extends "layout.html" %}
{% set active_page = "403" %}
{% block body %}
<div class="container">
<div class="row">
<p>&nbsp;</p>
</div>
<div class="row">
<div class="col-xs-12">
<center>
<h2>403: Permission Denied
</h2>
<p>You don't seem to be a member of the proper Github team or organization.
Please contact <a href="mailto:dcppc-inbox@gmail.com">dcppc-inbox@gmail.com</a>
if you believe you are seeing this message in error.
</p>
</center>
</div>
</div>
</div>
{% endblock %}

22
templates/404.html

@ -0,0 +1,22 @@ @@ -0,0 +1,22 @@
{% extends "layout.html" %}
{% set active_page = "404" %}
{% block body %}
<div class="container">
<div class="row">
<div class="col-xs-12">
<center>
<h2>404: Not Found
</h2>
<p>You have requested a page that does not exist.
Try clicking the centillion logo to go back home.
</p>
</center>
</div>
</div>
</div>
{% endblock %}

25
templates/banner.html

@ -0,0 +1,25 @@ @@ -0,0 +1,25 @@
<div class="container" id="banner-container">
{#
banner image
#}
<div class="row" id="banner-row">
<div class="col12sm" id="banner-col">
<center>
<a id="banner-a" href="{{ url_for('search')}}?query=&fields=">
<img id="banner-img" src="{{ url_for('static', filename='centillion_white.png') }}">
</a>
</center>
</div>
</div>
{% if config['TAGLINE'] %}
<div class="row" id="tagline-row">
<div class="col12sm" id="tagline-col">
<center>
<h2 id="tagline-tagline"> {{config['TAGLINE']}} </h2>
</center>
</div>
</div>
{% endif %}
</div>

76
templates/controlpanel.html

@ -1,52 +1,7 @@ @@ -1,52 +1,7 @@
{% extends "layout.html" %}
{% set active_page = "control_panel" %}
{% block body %}
{% with messages = get_flashed_messages() %}
{% if messages %}
<div class="container">
<div class="alert alert-success alert-dismissible">
<a href="#" class="close" data-dismiss="alert" aria-label="close">&times;</a>
<ul class=flashes>
{% for message in messages %}
<li>{{ message }}</li>
{% endfor %}
</ul>
</div>
</div>
{% endif %}
{% endwith %}
<div class="container">
<div class="row">
<div class="col-md-12">
<center>
<a href="{{ url_for('search')}}?query=&fields=">
<img src="{{ url_for('static', filename='centillion_white.png') }}">
</a>
{% if config['TAGLINE'] %}
<h2><a href="{{ url_for('search')}}?query=&fields=">
{{config['TAGLINE']}}
</a></h2>
{% endif %}
</center>
</div>
</div>
{% if config['zzzTAGLINE'] %}
<div class="row">
<div class="col12sm">
<center>
<h2><a href="{{ url_for('search')}}?query=&fields=">
{{config['TAGLINE']}}
</a></h2>
</center>
</div>
</div>
{% endif %}
</div>
<hr />
<div class="container">
@ -66,9 +21,9 @@ @@ -66,9 +21,9 @@
<div class="col-md-12">
<p class="panel-text">Re-index <i>every</i> document in the
remote collection in the search index. <b>Warning: this operation may take a while.</b>
<p/> <p>
<a href="{{ url_for('update_index') }}" class="btn btn-large btn-danger">Update Main Index</a>
<p/>
</p>
<p><a id="re-index-main" href="{{ url_for('update_index',run_which='all') }}" class="btn btn-large btn-danger btn-reindex-all">Update Main Index</a>
</p>
</div>
</div>
</div>
@ -76,22 +31,31 @@ @@ -76,22 +31,31 @@
</div>
</div>
{# update diff search index #}
{# update search index by type #}
<div class="panel panel-danger">
<div class="panel-heading">
<h3 class="panel-title">
Update Diff Search Index
Update Search Index by Type
</h3>
</div>
<div class="panel-body">
<div class="container-fluid">
<div class="row">
<div class="col-md-12">
<p class="panel-text">Diff search index only re-indexes documents created after the last
search index update. <b>Not currently implemented.</b>
<p/> <p>
<a href="#" class="btn btn-large disabled btn-danger">Update Diff Index</a>
<p/>
<p class="panel-text">Re-index individual document types in the search index.
</p>
<p><a href="{{ url_for('update_index',run_which='gdocs') }}" class="btn btn-large btn-danger btn-reindex-type">Update Google Drive Index</a>
</p>
<p><a href="{{ url_for('update_index',run_which='ghfiles') }}" class="btn btn-large btn-danger btn-reindex-type">Update Github Files Index</a>
</p>
<p><a href="{{ url_for('update_index',run_which='issues') }}" class="btn btn-large btn-danger btn-reindex-type">Update Github Issues Index</a>
</p>
<p><a href="{{ url_for('update_index',run_which='emailthreads') }}" class="btn btn-large btn-danger btn-reindex-type">Update Groups.io Email Threads Index</a>
</p>
<p><a href="{{ url_for('update_index',run_which='disqus') }}" class="btn btn-large btn-danger btn-reindex-type">Update Disqus Comment Threads Index</a>
</p>
</div>
</div>
</div>

14
templates/flashed_messages.html

@ -0,0 +1,14 @@ @@ -0,0 +1,14 @@
<div id="messages">
{% with messages = get_flashed_messages() %}
{% if messages %}
<div class="container" id="flashed-messages-container">
<div class="alert alert-success alert-dismissible fade in">
<a href="#" class="close" data-dismiss="alert" aria-label="close">&times;</a>
{% for message in messages %}
<p class="lead">{{ message }}</p>
{% endfor %}
</div>
</div>
{% endif %}
{% endwith %}
</div>

23
templates/landing.html

@ -0,0 +1,23 @@ @@ -0,0 +1,23 @@
{% extends "layout.html" %}
{% set active_page = "landing" %}
{% block body %}
<div class="container">
<div class="row">
<div class="col-xs-12">
<center>
<p class="lead">To begin searching the Data Commons, you must first sign in with Github.
</p>
<a href="/log_in" type="button" id="github-button" class="btn btn-default">
<i class="fa fa-github fa-2x"></i> Sign in with Github
</a>
</center>
</div>
</div>
</div>
{% endblock %}

56
templates/layout.html

@ -1,12 +1,66 @@ @@ -1,12 +1,66 @@
<!doctype html>
<title>Centillion Search Engine</title>
<link rel="stylesheet" type="text/css" href="{{ url_for('static', filename='style.css') }}">
<link rel="stylesheet" type="text/css" href="{{ url_for('static', filename='github-markdown.css') }}">
<link rel="stylesheet" type="text/css" href="{{ url_for('static', filename='bootstrap.min.css') }}">
<link rel="stylesheet" type="text/css" href="{{ url_for('static', filename='font-awesome.min.css') }}">
<script src="{{ url_for('static', filename='jquery.min.js') }}"></script>
<script src="{{ url_for('static', filename='bootstrap.min.js') }}"></script>
<script src="{{ url_for('static', filename='master_list.js') }}"></script>
<script src="{{ url_for('static', filename='search_list.js') }}"></script>
<script src="{{ url_for('static', filename='feedback.js') }}"></script>
{# ########## dataTables plugin ############ #}
<link rel="stylesheet" type="text/css" href="{{ url_for('static', filename='dataTables.bootstrap.min.css') }}">
<link rel="stylesheet" type="text/css" href="{{ url_for('static', filename='dataTables.responsive.css') }}">
<script src="{{ url_for('static', filename='jquery.dataTables.min.js') }}"></script>
<script src="{{ url_for('static', filename='dataTables.bootstrap.min.js') }}"></script>
<script src="{{ url_for('static', filename='dataTables.responsive.js') }}"></script>
<div id="master-div">
{#
flashed messages
#}
{% include "flashed_messages.html" %}
{#
banner image
#}
{% include "banner.html" %}
{#
feedback modal
#}
{% include "modal.html" %}
<div>
{% block body %}{% endblock %}
</div>
{% if active_page=="search" or active_page=="master_list" %}
{# feedback button #}
<button id="feedback" type="button"
data-toggle="modal"
data-target="#myModal"
class="btn btn-lg">Send Feedback</button>
{# vertical spacing before the bottom, b/c of button #}
<div id="footer-whitespace" class="container">
<p>&nbsp;</p>
<p>&nbsp;</p>
<p>&nbsp;</p>
</div>
{% endif %}
<a id="github-corner" href="https://github.com/dcppc/centillion" class="github-corner" aria-label="View source on Github"><svg width="80" height="80" viewBox="0 0 250 250" style="fill:#151513; color:#fff; position: absolute; top: 0; border: 0; right: 0;" aria-hidden="true"><path d="M0,0 L115,115 L130,115 L142,142 L250,250 L250,0 Z"></path><path d="M128.3,109.0 C113.8,99.7 119.0,89.6 119.0,89.6 C122.0,82.7 120.5,78.6 120.5,78.6 C119.2,72.0 123.4,76.3 123.4,76.3 C127.3,80.9 125.5,87.3 125.5,87.3 C122.9,97.6 130.6,101.9 134.4,103.2" fill="currentColor" style="transform-origin: 130px 106px;" class="octo-arm"></path><path d="M115.0,115.0 C114.9,115.1 118.7,116.5 119.8,115.4 L133.7,101.6 C136.9,99.2 139.9,98.4 142.2,98.6 C133.8,88.0 127.5,74.4 143.8,58.0 C148.5,53.4 154.0,51.2 159.7,51.0 C160.3,49.4 163.2,43.6 171.4,40.1 C171.4,40.1 176.1,42.5 178.8,56.2 C183.1,58.6 187.2,61.8 190.9,65.4 C194.5,69.0 197.7,73.2 200.1,77.6 C213.8,80.2 216.3,84.9 216.3,84.9 C212.7,93.1 206.9,96.0 205.4,96.6 C205.1,102.4 203.0,107.8 198.3,112.5 C181.9,128.9 168.3,122.5 157.7,114.1 C157.9,116.9 156.7,120.9 152.7,124.9 L141.0,136.5 C139.8,137.7 141.6,141.9 141.8,141.8 Z" fill="currentColor" class="octo-body"></path></svg></a><style>.github-corner:hover .octo-arm{animation:octocat-wave 560ms ease-in-out}@keyframes octocat-wave{0%,100%{transform:rotate(0)}20%,60%{transform:rotate(-25deg)}40%,80%{transform:rotate(10deg)}}@media (max-width:500px){.github-corner:hover .octo-arm{animation:none}.github-corner .octo-arm{animation:octocat-wave 560ms ease-in-out}}</style>

244
templates/masterlist.html

@ -0,0 +1,244 @@ @@ -0,0 +1,244 @@
{% extends "layout.html" %}
{% set active_page = "master_list" %}
{% block body %}
<hr />
<div class="container">
<div class="row">
{#
# google drive files panel
#}
<a name="gdoc"></a>
<div class="row">
<div class="panel">
<div class="panel-group" id="accordionDrive" role="tablist" aria-multiselectable="true">
<div class="panel panel-default">
<div class="panel-heading" role="tab" id="googleDrive">
<h2 class="masterlist-header">
<a class="collapsed"
role="button"
onClick="load_gdoc_table()"
data-toggle="collapse"
data-parent="#accordionDrive"
href="#collapseDrive"
aria-expanded="true"
aria-controls="collapseDrive">
Google Drive Files <small>indexed by centillion</small>
</a>
</h2>
</div>
<div id="collapseDrive" class="panel-collapse collapse" role="tabpanel" aria-labelledby="googleDrive">
<div class="panel-body">
<table class="table table-striped" id="gdocs-master-list">
</table>
</div>
</div>
</div>
</div>
</div>
</div>
{#
# github issue panel
#}
<a name="issue"></a>
<div class="row">
<div class="panel">
<div class="panel-group" id="accordionIssues" role="tablist" aria-multiselectable="true">
<div class="panel panel-default">
<div class="panel-heading" role="tab" id="githubIssues">
<h2 class="masterlist-header">
<a class="collapsed"
role="button"
onClick="load_issue_table()"
data-toggle="collapse"
data-parent="#accordionIssues"
href="#collapseIssues"
aria-expanded="true"
aria-controls="collapseIssues">
Github Issues <small>indexed by centillion</small>
</a>
</h2>
</div>
<div id="collapseIssues" class="panel-collapse collapse" role="tabpanel"
aria-labelledby="githubIssues">
<div class="panel-body">
<table class="table table-striped" id="issues-master-list">
</table>
</div>
</div>
</div>
</div>
</div>
</div>
{#
# github file panel
#}
<a name="ghfile"></a>
<div class="row">
<div class="panel">
<div class="panel-group" id="accordionFiles" role="tablist" aria-multiselectable="true">
<div class="panel panel-default">
<div class="panel-heading" role="tab" id="githubFiles">
<h2 class="masterlist-header">
<a class="collapsed"
role="button"
onClick="load_ghfile_table()"
data-toggle="collapse"
data-parent="#accordionFiles"
href="#collapseFiles"
aria-expanded="true"
aria-controls="collapseFiles">
Github Files <small>indexed by centillion</small>
</a>
</h2>
</div>
<div id="collapseFiles" class="panel-collapse collapse" role="tabpanel"
aria-labelledby="githubFiles">
<div class="panel-body">
<table class="table table-striped" id="ghfiles-master-list">
</table>
</div>
</div>
</div>
</div>
</div>
</div>
{#
# gh markdown file panel
#}
<a name="markdown"></a>
<div class="row">
<div class="panel">
<div class="panel-group" id="accordionMarkdown" role="tablist" aria-multiselectable="true">
<div class="panel panel-default">
<div class="panel-heading" role="tab" id="markdown">
<h2 class="masterlist-header">
<a class="collapsed"
role="button"
onClick="load_markdown_table()"
data-toggle="collapse"
data-parent="#accordionMarkdown"
href="#collapseMarkdown"
aria-expanded="true"
aria-controls="collapseMarkdown">
Github Markdown Files <small>indexed by centillion</small>
</a>
</h2>
</div>
<div id="collapseMarkdown" class="panel-collapse collapse" role="tabpanel"
aria-labelledby="markdown">
<div class="panel-body">
<table class="table table-striped" id="markdown-master-list">
</table>
</div>
</div>
</div>
</div>
</div>
</div>
{#
# groups.io email threads
#}
<a name="emailthread"></a>
<div class="row">
<div class="panel">
<div class="panel-group" id="accordionThreads" role="tablist" aria-multiselectable="true">
<div class="panel panel-default">
<div class="panel-heading" role="tab" id="threads">
<h2 class="masterlist-header">
<a class="collapsed"
role="button"
onClick="load_emailthreads_table()"
data-toggle="collapse"
data-parent="#accordionThreads"
href="#collapseThreads"
aria-expanded="true"
aria-controls="collapseThreads">
Groups.io Email Threads <small>indexed by centillion</small>
</a>
</h2>
</div>
<div id="collapseThreads" class="panel-collapse collapse" role="tabpanel"
aria-labelledby="threads">
<div class="panel-body">
<table class="table table-striped" id="emailthreads-master-list">
</table>
</div>
</div>
</div>
</div>
</div>
</div>
{#
# disqus comment threads
#}
<a name="disqus"></a>
<div class="row">
<div class="panel">
<div class="panel-group" id="accordionDisqus" role="tablist" aria-multiselectable="true">
<div class="panel panel-default">
<div class="panel-heading" role="tab" id="disqus">
<h2 class="masterlist-header">
<a class="collapsed"
role="button"
onClick="load_disqusthreads_table()"
data-toggle="collapse"
data-parent="#accordionDisqus"
href="#collapseDisqus"
aria-expanded="true"
aria-controls="collapseDisqus">
Disqus Comment Threads <small>indexed by centillion</small>
</a>
</h2>
</div>
<div id="collapseDisqus" class="panel-collapse collapse" role="tabpanel"
aria-labelledby="disqus">
<div class="panel-body">
<table class="table table-striped" id="disqus-master-list">
</table>
</div>
</div>
</div>
</div>
</div>
</div>
</div>
{% endblock %}

51
templates/modal.html

@ -0,0 +1,51 @@ @@ -0,0 +1,51 @@
<div class="modal fade" id="myModal" tabindex="-1" role="dialog" aria-labelledby="myModalLabel">
<form id="myModalForm" method="post">
<div class="modal-dialog" role="document">
<div id="myModal-content" class="modal-content">
<div id="myModal-header" class="modal-header">
<button type="button" class="close" data-dismiss="modal" aria-label="Close">
<span aria-hidden="true">&times;</span>
</button>
<h4 class="modal-title" id="myModalLabel">
Send us feedback!
</h4>
</div>
<div id="myModal-body" class="modal-body">
<div id="modal-feedback-smile-frown-container" class="container-fluid">
<div id="modal-feedback-smile-div" class="col-xs-6 text-center"
onClick="smile()">
<i id="modal-feedback-smile-icon" class="fa fa-smile-o fa-4x" aria-hidden="true"></i>
</div>
<div id="modal-feedback-frown-div" class="col-xs-6 text-center"
onClick="frown()">
<i id="modal-feedback-frown-icon" class="fa fa-frown-o fa-4x" aria-hidden="true"></i>
</div>
</div>
<div class="container-fluid">
<p>&nbsp;</p>
</div>
<div id="modal-feedback-textarea-container" class="container-fluid">
<textarea id="modal-feedback-textarea" rows="6"></textarea>
</div>
<div id="modal-too-long" class="container-fluid" >
<p id="modal-too-long-text" class="lead">Please limit the length of your feedback. Thank you in advance!</p>
</div>
</div>
<div id="myModal-footer" class="modal-footer">
<div class="text-center">
<button id="submit-feedback-btn" type="button"
onClick="submit_feedback()"
class="btn btn-lg btn-primary">
Send
</button>
</div>
</div>
</div>
</div>
</form>
</div>

165
templates/oldsearch.html

@ -0,0 +1,165 @@ @@ -0,0 +1,165 @@
{% extends "layout.html" %}
{% block body %}
<div class="container">
<div class="row">
<div class="col-xs-12">
<center>
<form action="{{ url_for('search') }}" name="search">
<p><input type="text" name="query" value="{{ query }}">
</p>
<p><button id="the-big-one" type="submit" style="font-size: 20px; padding: 10px; padding-left: 50px; padding-right: 50px;"
value="search" class="btn btn-primary">Search</button>
</p>
<p><a href="{{ url_for('search')}}?query=&fields=">[clear all results]</a>
</p>
</form>
</center>
</div>
</div>
</div>
<div class="container">
<div class="row">
{% if directories %}
<div class="col-xs-12 info directories-cloud">
<b>File directories:</b>
{% for d in directories %}
<a href="{{url_for('search')}}?query={{d|trim}}&fields=filename">{{d|trim}}</a>
{% endfor %}
</div>
{% endif %}
<ul class="list-group">
{% if config['SHOW_PARSED_QUERY'] and parsed_query %}
<li class="list-group-item">
<div class="container-fluid">
<div class="row">
<div class="col-xs-12 info">
<b>Parsed query:</b> {{ parsed_query }}
</div>
</div>
</div>
</li>
{% endif %}
{% if parsed_query %}
<li class="list-group-item">
<div class="container-fluid">
<div class="row">
<div class="col-xs-12 info">
<b>Found:</b> <span class="badge">{{entries|length}}</span> results
out of <span class="badge">{{totals["total"]}}</span> total items indexed
</div>
</div>
</div>
</li>
{% endif %}
<li class="list-group-item">
<div class="container-fluid">
<div class="row">
<div class="col-xs-12 info">
<b>Indexing:</b>
<span class="badge">{{totals["gdoc"]}}</span>
<a href="/master_list?doctype=gdoc">
Google Drive files
</a>,
<span class="badge">{{totals["issue"]}}</span>
<a href="/master_list?doctype=issue">
Github issues
</a>,
<span class="badge">{{totals["ghfile"]}}</span>
<a href="/master_list?doctype=ghfile">
Github files
</a>,
<span class="badge">{{totals["markdown"]}}</span>
<a href="/master_list?doctype=markdown">
Github Markdown files
</a>,
<span class="badge">{{totals["emailthread"]}}</span>
<a href="/master_list?doctype=emailthread">
Groups.io email threads
</a>
</div>
</div>
</div>
</li>
</ul>
</div>
</div>
<div class="container">
<div class="row">
<ul class="list-group">
{% for e in entries %}
<li class="search-group-item">
<div class="url">
{% if e.kind=="gdoc" %}
{% if e.mimetype=="" %}
<b>Google Document:</b>
<a href='{{e.url}}'>{{e.title}}</a>
(Owner: {{e.owner_name}}, {{e.owner_email}})<br />
<b>Document Type</b>: {{e.mimetype}}
{% else %}
<b>Google Drive File:</b>
<a href='{{e.url}}'>{{e.title}}</a><br />
<b>Owner:</b> {{e.owner_name}}, {{e.owner_email}}<br />
{% endif %}
{% elif e.kind=="issue" %}
<b>Github Issue:</b>
<a href='{{e.url}}'>{{e.title}}</a>
{% if e.github_user %}<br />
<b>Opened by:</b> <a href='https://github.com/{{e.github_user}}'>@{{e.github_user}}</a>
{% endif %}
<br/>
<b>Repository:</b> <a href='{{e.repo_url}}'>{{e.repo_name}}</a>
{% elif e.kind=="markdown" %}
<b>Github Markdown:</b>
<a href='{{e.url}}'>{{e.title}}</a>
<br/>
<b>Repository:</b> <a href='{{e.repo_url}}'>{{e.repo_name}}</a>
{% elif e.kind=="emailthread" %}
<b>Groups.io Email Thread:</b>
<a href='{{e.url}}'>{{e.title}}</a>
<br/>
<b>Started By:</b> {{e.owner_name}}
{% else %}
<b>Item:</b> (<a href='{{e.url}}'>link</a>)
{% endif %}
<br />
Score: {{'%d' % e.score}}
</div>
<div class="markdown-body">
{% if e.content_highlight %}
{{ e.content_highlight|safe}}
{% else %}
<p>(A preview of this document is not available.)</p>
{% endif %}
</div>
</li>
{% endfor %}
</ul>
</div>
</div>
{% endblock %}

201
templates/search.html

@ -1,59 +1,34 @@ @@ -1,59 +1,34 @@
{% extends "layout.html" %}
{% set active_page = "search" %}
{% block body %}
<div class="container">
{#
banner image
#}
<div class="row">
<div class="col12sm">
<center>
<a href="{{ url_for('search')}}?query=&fields=">
<img src="{{ url_for('static', filename='centillion_white.png') }}">
</a>
{#
need a tag line
#}
{% if config['TAGLINE'] %}
<h2><a href="{{ url_for('search')}}?query=&fields=">
{{config['TAGLINE']}}
</a></h2>
{% endif %}
</center>
</div>
</div>
</div>
<div class="container">
<div id="search-bar-container" class="container">
<div class="row">
<div class="col-xs-12">
<center>
<form action="{{ url_for('search') }}" name="search">
<input type="text" name="query" value="{{ query }}"> <br />
<button type="submit" style="font-size: 20px; padding: 10px; padding-left: 50px; padding-right: 50px;"
<p><input type="text" name="query" value="{{ query }}">
</p>
<p><button id="the-big-one" type="submit" style="font-size: 20px; padding: 10px; padding-left: 50px; padding-right: 50px;"
value="search" class="btn btn-primary">Search</button>
<br />
<a href="{{ url_for('search')}}?query=&fields=">[clear all results]</a>
</p>
{% if parsed_query %}
<p><a href="{{ url_for('search')}}?query=&fields=">[clear all results]</a>
{% endif %}
</p>
</form>
</center>
</div>
</div>
</div>
<div class="container">
<div class="row">
<div style="height: 20px;"><p>&nbsp;</p></div>
{% if directories %}
<div class="col-xs-12 info directories-cloud">
<b>File directories:</b>
{% for d in directories %}
<a href="{{url_for('search')}}?query={{d|trim}}&fields=filename">{{d|trim}}</a>
{% endfor %}
</div>
{% endif %}
<div id="info-bars-container" class="container">
<div class="row">
<ul class="list-group">
@ -69,6 +44,9 @@ @@ -69,6 +44,9 @@
</li>
{% endif %}
{# use "if parsed_query" to check if this is
a new search or search results #}
{% if parsed_query %}
<li class="list-group-item">
<div class="container-fluid">
@ -82,15 +60,42 @@ @@ -82,15 +60,42 @@
</li>
{% endif %}
<li class="list-group-item">
<div class="container-fluid">
<div class="row">
<div class="col-xs-12 info">
<b>Indexing:</b> <span
class="badge">{{totals["gdoc"]}}</span> Google Documents,
<span class="badge">{{totals["issue"]}}</span> Github issues,
<span class="badge">{{totals["ghfile"]}}</span> Github files,
<span class="badge">{{totals["markdown"]}}</span> Github markdown files.
<b>Indexing:</b>
<span class="badge">{{totals["gdoc"]}}</span>
<a href="/master_list?doctype=gdoc#gdoc">
Google Drive files
</a>,
<span class="badge">{{totals["issue"]}}</span>
<a href="/master_list?doctype=issue#issue">
Github issues
</a>,
<span class="badge">{{totals["ghfile"]}}</span>
<a href="/master_list?doctype=ghfile#ghfile">
Github files
</a>,
<span class="badge">{{totals["markdown"]}}</span>
<a href="/master_list?doctype=markdown#markdown">
Github Markdown files
</a>,
<span class="badge">{{totals["emailthread"]}}</span>
<a href="/master_list?doctype=emailthread#emailthread">
Groups.io email threads
</a>,
<span class="badge">{{totals["disqus"]}}</span>
<a href="/master_list?doctype=disqus#disqus">
Disqus comment threads
</a>
</div>
</div>
</div>
@ -100,13 +105,58 @@ @@ -100,13 +105,58 @@
</div>
</div>
<div class="container">
{% if parsed_query %}
<div id="search-results-container" class="container">
<div class="row">
<ul class="list-group">
<table id="search-results" class="table">
<thead id="search-results-header">
<tr id="search-results-header-row">
<td id="search-results-score-col">
Score
</td>
<td id="search-results-type-col">
Type
</td>
<td id="search-results-details-col">
Result Details
</td>
</tr>
</thead>
<tbody>
{% for e in entries %}
<li class="search-group-item">
<tr>
<td>
{{'%d' % e.score}}
</td>
<td>
{% if e.kind=="gdoc" %}
{% if e.mimetype=="document" %}
<p><small>Drive Document</small</p>
{% else %}
<p><small>Drive File</small</p>
{% endif %}
{% elif e.kind=="issue" %}
<p><small>Issue</small</p>
{% elif e.kind=="ghfile" %}
<p><small>Github File</small</p>
{% elif e.kind=="markdown" %}
<p><small>Github Markdown</small</p>
{% elif e.kind=="emailthread" %}
<p><small>Email Thread</small</p>
{% else %}
<p><small>Unknown</small</p>
{% endif %}
</td>
<td>
<ul class="list-group">
<li class="search-group-item">
<div class="url">
{% if e.kind=="gdoc" %}
{% if e.mimetype=="" %}
@ -115,32 +165,42 @@ @@ -115,32 +165,42 @@
(Owner: {{e.owner_name}}, {{e.owner_email}})<br />
<b>Document Type</b>: {{e.mimetype}}
{% else %}
<b>Google Drive:</b>
<a href='{{e.url}}'>{{e.title}}</a>
(Owner: {{e.owner_name}}, {{e.owner_email}})
<b>Google Drive File:</b>
<a href='{{e.url}}'>{{e.title}}</a><br />
<b>Owner:</b> {{e.owner_name}}, {{e.owner_email}}<br />
{% endif %}
{% elif e.kind=="issue" %}
<b>Github Issue:</b>
<a href='{{e.url}}'>{{e.title}}</a>
{% if e.github_user %}
opened by <a href='https://github.com/{{e.github_user}}'>@{{e.github_user}}</a>
{% if e.github_user %}<br />
<b>Opened by:</b> <a href='https://github.com/{{e.github_user}}'>@{{e.github_user}}</a>
{% endif %}
<br/>
<b>Repository:</b> <a href='{{e.repo_url}}'>{{e.repo_name}}</a>
{% elif e.kind=="ghfile" %}
<b>Github File:</b>
<a href='{{e.url}}'>{{e.title}}</a>
<br/>
<b>Repository:</b> <a href='{{e.repo_url}}'>{{e.repo_name}}</a>
{% elif e.kind=="markdown" %}
<b>Github Markdown:</b>
<a href='{{e.url}}'>{{e.title}}</a>
<br/>
<b>Repository:</b> <a href='{{e.repo_url}}'>{{e.repo_name}}</a>
{% elif e.kind=="emailthread" %}
<b>Groups.io Email Thread:</b>
<a href='{{e.url}}'>{{e.title}}</a>
<br/>
<b>Started By:</b> {{e.owner_name}}
{% else %}
<b>Item:</b> (<a href='{{e.url}}'>link</a>)
{% endif %}
<br />
Score: {{'%d' % e.score}}
</div>
<div class="markdown-body">
{% if e.content_highlight %}
@ -149,40 +209,19 @@ @@ -149,40 +209,19 @@
<p>(A preview of this document is not available.)</p>
{% endif %}
</div>
</li>
{% endfor %}
</ul>
</td>
</tr>
</div>
</div>
<div class="container">
<div class="row">
<ul class="list-group">
{% endfor %}
{% if config['FOOTER_REPO_NAME'] %}
{% if config['FOOTER_REPO_ORG'] %}
</tbody>
</table>
<li class="list-group-item">
<div class="container-fluid">
<div class="row">
<div class="col-xs-12 info">
More information about {{config['FOOTER_REPO_NAME']}} can be found
in the <a href="https://github.com/{{config['FOOTER_REPO_ORG']}}/{{config['FOOTER_REPO_NAME']}}">{{config['FOOTER_REPO_ORG']}}/{{config['FOOTER_REPO_NAME']}}</a>
repository on Github.
</div>
</div>
</div>
</li>
{% endif %}
{% endif %}
</ul>
</div>
</div>
{% endblock %}

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