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Move basic environment yml file

master
Charles Reid 7 years ago
parent
commit
946968de26
  1. 11
      envs/basic.yml
  2. 6
      taxclass.settings

11
envs/basic.yml

@ -0,0 +1,11 @@ @@ -0,0 +1,11 @@
channels:
- conda-forge
- bioconda
- r
- defaults
dependencies:
- graphviz=2.38.0
- python=3.5.1
- snakemake=3.11.0
- pyyaml=3.11

6
taxclass.settings

@ -1,7 +1,9 @@ @@ -1,7 +1,9 @@
from snakemake.utils import update_config
# Questions:
# - can you put wildcards like {database} or {ksize} into these strings?
# Note: you can put wildcards into these strings,
# and they will be interpreted by Snakemake in context,
# but keep in mind wildcards must be formatted
# differently for input/output vs shell/run blocks.
config_default = {

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