* convert 2018-snakemake-cli to python package (setup.py)
converts the simple example in 2018-snakemake-cli,
which used a shell script sitting in a directory to
run the Snakemake workflow, into a full-fledged
python package that uses a setup.py file.
this is a way of bridging the complexity of taco
with the simplicity of 2018-snakemake-cli.
documentation/readme has not yet been updated.
tests have not yet been udpated.
* update how/where we look for Snakefile
* add Snakefile to manifest
* move config and params to test/
* include Snakefile with Manifest.in to make it run automagically
* update readme instructions
* manifest should include files, not graft them (graft is for directories)
* update gh-pages url in setup.py
* fix tests and fix the way we are looking for param and config files (use os.getcwd())
* clean up after test
* banana -> bananas. update gitignore.
* add .travis.yml
* change newline to trigger travis
* add shields
* python version >= 3.5
* remove unused import
* travis.yml: python 3.7 -> 3.7-dev
* remove 3.7-dev from travis
* change newline to trigger travis
Charles Reid
C. Titus Brown