fix styles

add string formatting for dates and add date/mailing list column to email threads master list

.github/PULL_REQUEST_TEMPLATE.md

@@ -0,0 +1,12 @@
+Thanks for contributing to centillion!
+
+Please place an x between the brackets to indicate a yes answer
+to the questions below.
+
+- [ ] Is this pull request mergeable?
+- [ ] Has this been tested locally?
+- [ ] Does this pull request pass the tests?
+- [ ] Have new tests been added to cover any new code?
+- [ ] Was a spellchecker run on the source code and documentation after
+  changes were made?
+

CODE_OF_CONDUCT.md

@@ -0,0 +1,43 @@
+# Code of Conduct
+
+## DCPPC Code of Conduct
+
+All members of the Commons are expected to agree with the following code
+of conduct. We will enforce this code as needed. We expect cooperation
+from all members to help ensuring a safe environment for everybody.
+
+## The Quick Version
+
+The Consortium is dedicated to providing a harassment-free experience
+for everyone, regardless of gender, gender identity and expression, age,
+sexual orientation, disability, physical appearance, body size, race, or
+religion (or lack thereof). We do not tolerate harassment of Consortium
+members in any form. Sexual language and imagery is generally not
+appropriate for any venue, including meetings, presentations, or
+discussions.
+
+## The Less Quick Version
+
+Harassment includes offensive verbal comments related to gender, gender
+identity and expression, age, sexual orientation, disability, physical
+appearance, body size, race, religion, sexual images in public spaces,
+deliberate intimidation, stalking, following, harassing photography or
+recording, sustained disruption of talks or other events, inappropriate
+physical contact, and unwelcome sexual attention.
+
+Members asked to stop any harassing behavior are expected to comply
+immediately.
+
+If you are being harassed, notice that someone else is being harassed,
+or have any other concerns, please contact [Titus
+Brown](mailto:ctbrown@ucdavis.edu) immediately. If Titus is the cause of
+your concern, please contact [Vivien
+Bonazzi](mailto:bonazziv@mail.nih.gov).
+
+We expect members to follow these guidelines at any Consortium event.
+
+Original source and credit: <http://2012.jsconf.us/#/about> & The Ada
+Initiative. Please help by translating or improving:
+<http://github.com/leftlogic/confcodeofconduct.com>. This work is
+licensed under a Creative Commons Attribution 3.0 Unported License
+

CONTRIBUTING.md

@@ -0,0 +1,21 @@
+# Contributing to the DCPPC Internal Repository
+
+Hello, and thank you for wanting to contribute to the DCPPC Internal
+Repository\!
+
+By contributing to this repository, you agree:
+
+1.  To obey the [Code of Conduct](./CODE_OF_CONDUCT.md)
+2.  To release all your contributions under the same terms as the
+    license itself: the [Creative Commons Zero](./LICENSE.md) (aka
+    Public Domain) license
+
+If you are OK with these two conditions, then we welcome both you and
+your contribution\!
+
+If you have any questions about contributing, please [open an
+issue](https://github.com/dcppc/internal/issues/new) and Team Copper
+will lend a hand ASAP.
+
+Thank you for being here and for being a part of the DCPPC project.
+

Hypothesis.md

@@ -0,0 +1,249 @@
+# Hypothesis API
+
+
+## Authenticating
+
+Example output call for authenticating with the API:
+
+```
+{
+    "links": {
+        "profile": {
+            "read": {
+                "url": "https://hypothes.is/api/profile",
+                "method": "GET",
+                "desc": "Fetch the user's profile"
+            },
+            "update": {
+                "url": "https://hypothes.is/api/profile",
+                "method": "PATCH",
+                "desc": "Update a user's preferences"
+            }
+        },
+        "search": {
+            "url": "https://hypothes.is/api/search",
+            "method": "GET",
+            "desc": "Search for annotations"
+        },
+        "group": {
+            "member": {
+                "add": {
+                    "url": "https://hypothes.is/api/groups/:pubid/members/:userid",
+                    "method": "POST",
+                    "desc": "Add the user in the request params to a group."
+                },
+                "delete": {
+                    "url": "https://hypothes.is/api/groups/:pubid/members/:userid",
+                    "method": "DELETE",
+                    "desc": "Remove the current user from a group."
+                }
+            }
+        },
+        "links": {
+            "url": "https://hypothes.is/api/links",
+            "method": "GET",
+            "desc": "URL templates for generating URLs for HTML pages"
+        },
+        "groups": {
+            "read": {
+                "url": "https://hypothes.is/api/groups",
+                "method": "GET",
+                "desc": "Fetch the user's groups"
+            }
+        },
+        "annotation": {
+            "hide": {
+                "url": "https://hypothes.is/api/annotations/:id/hide",
+                "method": "PUT",
+                "desc": "Hide an annotation as a group moderator."
+            },
+            "unhide": {
+                "url": "https://hypothes.is/api/annotations/:id/hide",
+                "method": "DELETE",
+                "desc": "Unhide an annotation as a group moderator."
+            },
+            "read": {
+                "url": "https://hypothes.is/api/annotations/:id",
+                "method": "GET",
+                "desc": "Fetch an annotation"
+            },
+            "create": {
+                "url": "https://hypothes.is/api/annotations",
+                "method": "POST",
+                "desc": "Create an annotation"
+            },
+            "update": {
+                "url": "https://hypothes.is/api/annotations/:id",
+                "method": "PATCH",
+                "desc": "Update an annotation"
+            },
+            "flag": {
+                "url": "https://hypothes.is/api/annotations/:id/flag",
+                "method": "PUT",
+                "desc": "Flag an annotation for review."
+            },
+            "delete": {
+                "url": "https://hypothes.is/api/annotations/:id",
+                "method": "DELETE",
+                "desc": "Delete an annotation"
+            }
+        }
+    }
+}
+```
+
+
+## Listing
+
+Here is the result of the API call to list an annotation
+given its annotation ID:
+
+```
+{
+    "updated": "2018-07-26T10:20:47.803636+00:00",
+    "group": "__world__",
+    "target": [
+        {
+            "source": "https://h.readthedocs.io/en/latest/api/authorization/",
+            "selector": [
+                {
+                    "conformsTo": "https://tools.ietf.org/html/rfc3236",
+                    "type": "FragmentSelector",
+                    "value": "access-tokens"
+                },
+                {
+                    "endContainer": "/div[1]/section[1]/div[1]/div[1]/div[2]/div[1]/div[1]/div[2]/p[2]",
+                    "startContainer": "/div[1]/section[1]/div[1]/div[1]/div[2]/div[1]/div[1]/div[2]/p[1]",
+                    "type": "RangeSelector",
+                    "startOffset": 14,
+                    "endOffset": 116
+                },
+                {
+                    "type": "TextPositionSelector",
+                    "end": 2234,
+                    "start": 1374
+                },
+                {
+                    "exact": "hich read or write data as a specific user need to be authorized\nwith an access token. Access tokens can be obtained in two ways:\n\nBy generating a personal API token on the Hypothesis developer\npage (you must be logged in to\nHypothesis to get to this page). This is the simplest method, however\nthese tokens are only suitable for enabling your application to make\nrequests as a single specific user.\n\nBy registering an \u201cOAuth client\u201d and\nimplementing the OAuth authentication flow\nin your application. This method allows any user to authorize your\napplication to read and write data via the API as that user.  The Hypothesis\nclient is an example of an application that uses OAuth.\nSee Using OAuth for details of how to implement this method.\n\n\nOnce an access token has been obtained, requests can be authorized by putting\nthe token in the Authorization header.",
+                    "prefix": "\n\n\nAccess tokens\u00b6\nAPI requests w",
+                    "type": "TextQuoteSelector",
+                    "suffix": "\nExample request:\nGET /api HTTP/"
+                }
+            ]
+        }
+    ],
+    "links": {
+        "json": "https://hypothes.is/api/annotations/kEaohJC9Eeiy_UOozkpkyA",
+        "html": "https://hypothes.is/a/kEaohJC9Eeiy_UOozkpkyA",
+        "incontext": "https://hyp.is/kEaohJC9Eeiy_UOozkpkyA/h.readthedocs.io/en/latest/api/authorization/"
+    },
+    "tags": [],
+    "text": "sdfsdf",
+    "created": "2018-07-26T10:20:47.803636+00:00",
+    "uri": "https://h.readthedocs.io/en/latest/api/authorization/",
+    "flagged": false,
+    "user_info": {
+        "display_name": null
+    },
+    "user": "acct:Aravindan@hypothes.is",
+    "hidden": false,
+    "document": {
+        "title": [
+            "Authorization \u2014 h 0.0.2 documentation"
+        ]
+    },
+    "id": "kEaohJC9Eeiy_UOozkpkyA",
+    "permissions": {
+        "read": [
+            "group:__world__"
+        ],
+        "admin": [
+            "acct:Aravindan@hypothes.is"
+        ],
+        "update": [
+            "acct:Aravindan@hypothes.is"
+        ],
+        "delete": [
+            "acct:Aravindan@hypothes.is"
+        ]
+    }
+}
+```
+
+## Searching
+
+Here is the output from a call to the endpoint to search annotations
+(we pass a specific URL to the search function):
+
+```
+{
+    "rows": [
+        {
+            "updated": "2018-08-10T02:21:46.898833+00:00",
+            "group": "__world__",
+            "target": [
+                {
+                    "source": "http://pilot.data-commons.us/organize/CopperInternalDeliveryWorkFlow/",
+                    "selector": [
+                        {
+                            "endContainer": "/div[1]/main[1]/div[1]/div[3]/article[1]/h2[1]",
+                            "startContainer": "/div[1]/main[1]/div[1]/div[3]/article[1]/h2[1]",
+                            "type": "RangeSelector",
+                            "startOffset": 0,
+                            "endOffset": 80
+                        },
+                        {
+                            "type": "TextPositionSelector",
+                            "end": 12328,
+                            "start": 12248
+                        },
+                        {
+                            "exact": "Deliverables are due internally on the first of each month, which here is Day 1,",
+                            "prefix": "               \n                ",
+                            "type": "TextQuoteSelector",
+                            "suffix": "\u00b6\nDay -30 through -10\nCopper PM "
+                        }
+                    ]
+                }
+            ],
+            "links": {
+                "json": "https://hypothes.is/api/annotations/IY2W_pxEEeiVuxfD3sehjQ",
+                "html": "https://hypothes.is/a/IY2W_pxEEeiVuxfD3sehjQ",
+                "incontext": "https://hyp.is/IY2W_pxEEeiVuxfD3sehjQ/pilot.data-commons.us/organize/CopperInternalDeliveryWorkFlow/"
+            },
+            "tags": [],
+            "text": "This is a sample annotation",
+            "created": "2018-08-10T02:21:46.898833+00:00",
+            "uri": "http://pilot.data-commons.us/organize/CopperInternalDeliveryWorkFlow/",
+            "flagged": false,
+            "user_info": {
+                "display_name": null
+            },
+            "user": "acct:charlesreid1dib@hypothes.is",
+            "hidden": false,
+            "document": {
+                "title": [
+                    "Copper Internal Delivery Workflow - Data Commons Internal Site"
+                ]
+            },
+            "id": "IY2W_pxEEeiVuxfD3sehjQ",
+            "permissions": {
+                "read": [
+                    "group:__world__"
+                ],
+                "admin": [
+                    "acct:charlesreid1dib@hypothes.is"
+                ],
+                "update": [
+                    "acct:charlesreid1dib@hypothes.is"
+                ],
+                "delete": [
+                    "acct:charlesreid1dib@hypothes.is"
+                ]
+            }
+        }
+    ],
+    "total": 1
+}
+```
+

centillion.py

@@ -40,6 +40,7 @@ class UpdateIndexTask(object):
                 'groupsio_username' :  app_config['GROUPSIO_USERNAME'],
                 'groupsio_password' :  app_config['GROUPSIO_PASSWORD']
         }
+        self.disqus_token = app_config['DISQUS_TOKEN']
         thread.daemon = True
         thread.start()
 
@@ -54,6 +55,7 @@ class UpdateIndexTask(object):
 
         search.update_index(self.groupsio_credentials,
                             self.gh_token,
+                            self.disqus_token,
                             self.run_which,
                             config)
 
@@ -265,7 +267,11 @@ def list_docs(doctype):
             if org['login']=='dcppc':
                 # Business as usual
                 search = Search(app.config["INDEX_DIR"])
-                return jsonify(search.get_list(doctype))
+                results_list = search.get_list(doctype)
+                for result in results_list:
+                    ct = result['created_time']
+                    result['created_time'] = datetime.strftime(ct,"%Y-%m-%d %I:%M %p")
+                return jsonify(results_list)
 
     # nope
     return render_template('403.html')
@@ -347,5 +353,5 @@ if __name__ == '__main__':
         port = 5000
     else:
         port = int(port)
-    app.run(host="0.0.0.0",port=port)
+    app.run(host="0.0.0.0", port=port)
 

centillion_search.py

@@ -6,6 +6,8 @@ import base64
 
 from gdrive_util import GDrive
 from groupsio_util import GroupsIOArchivesCrawler, GroupsIOException
+from disqus_util import DisqusCrawler
+
 from apiclient.http import MediaIoBaseDownload
 
 import mistune
@@ -19,8 +21,11 @@ import codecs
 from datetime import datetime
 import dateutil.parser
 
+from whoosh import query
 from whoosh.qparser import MultifieldParser, QueryParser
-from whoosh.analysis import StemmingAnalyzer
+from whoosh.analysis import StemmingAnalyzer, LowercaseFilter, StopFilter
+from whoosh.qparser.dateparse import DateParserPlugin
+from whoosh import fields, index
 
 
 """
@@ -103,10 +108,21 @@ class Search:
     # ------------------------------
     # Update the entire index
 
-    def update_index(self, groupsio_credentials, gh_token, run_which, config):
+    def update_index(self, groupsio_credentials, gh_token, disqus_token, run_which, config):
         """
         Update the entire search index
         """
+        if run_which=='all' or run_which=='disqus':
+            try:
+                self.update_index_disqus(disqus_token, config)
+            except Exception as e:
+                print("ERROR: While re-indexing: failed to update Disqus comment threads")
+                print("-"*40)
+                print(repr(e))
+                print("-"*40)
+                print("Continuing...")
+                pass
+
         if run_which=='all' or run_which=='emailthreads':
             try:
                 self.update_index_emailthreads(groupsio_credentials, config)
@@ -172,7 +188,8 @@ class Search:
             os.mkdir(index_folder)
 
         exists = index.exists_in(index_folder)
-        stemming_analyzer = StemmingAnalyzer()
+        #stemming_analyzer = StemmingAnalyzer()
+        stemming_analyzer = StemmingAnalyzer() | LowercaseFilter() | StopFilter()
 
         
         # ------------------------------
@@ -180,30 +197,38 @@ class Search:
         # is defined.
 
         schema = Schema(
-                id = ID(stored=True, unique=True),
-                kind = ID(stored=True),
+                id = fields.ID(stored=True, unique=True),
+                kind = fields.ID(stored=True),
 
-                created_time = ID(stored=True),
-                modified_time = ID(stored=True),
-                indexed_time = ID(stored=True),
+                created_time = fields.DATETIME(stored=True),
+                modified_time = fields.DATETIME(stored=True),
+                indexed_time = fields.DATETIME(stored=True),
                 
-                title = TEXT(stored=True, field_boost=100.0),
-                url = ID(stored=True, unique=True),
-                
-                mimetype=ID(stored=True),
-                owner_email=ID(stored=True),
-                owner_name=TEXT(stored=True),
-                
-                repo_name=TEXT(stored=True),
-                repo_url=ID(stored=True),
+                title = fields.TEXT(stored=True, field_boost=100.0),
 
-                github_user=TEXT(stored=True),
+                url = fields.ID(stored=True),
+                
+                mimetype = fields.TEXT(stored=True),
+
+                owner_email = fields.ID(stored=True),
+                owner_name = fields.TEXT(stored=True),
+
+                # mainly for email threads, groups.io, hypothesis
+                group = fields.ID(stored=True),
+
+                repo_name = fields.TEXT(stored=True),
+                repo_url = fields.ID(stored=True),
+                github_user = fields.TEXT(stored=True),
+
+                tags = fields.KEYWORD(commas=True,
+                                      stored=True,
+                                      lowercase=True),
 
                 # comments only
-                issue_title=TEXT(stored=True, field_boost=100.0),
-                issue_url=ID(stored=True),
+                issue_title = fields.TEXT(stored=True, field_boost=100.0),
+                issue_url = fields.ID(stored=True),
                 
-                content=TEXT(stored=True, analyzer=stemming_analyzer)
+                content = fields.TEXT(stored=True, analyzer=stemming_analyzer)
         )
 
 
@@ -243,24 +268,32 @@ class Search:
             writer.delete_by_term('id',item['id'])
 
             # Index a plain google drive file
-            writer.add_document(
-                    id = item['id'],
-                    kind = 'gdoc',
-                    created_time = item['createdTime'],
-                    modified_time = item['modifiedTime'],
-                    indexed_time = datetime.now().replace(microsecond=0).isoformat(),
-                    title = item['name'],
-                    url = item['webViewLink'],
-                    mimetype = mimetype,
-                    owner_email = item['owners'][0]['emailAddress'],
-                    owner_name = item['owners'][0]['displayName'],
-                    repo_name='',
-                    repo_url='',
-                    github_user='',
-                    issue_title='',
-                    issue_url='',
-                    content = content
-            )
+            created_time = dateutil.parser.parse(item['createdTime'])
+            modified_time = dateutil.parser.parse(item['modifiedTime'])
+            indexed_time = datetime.now().replace(microsecond=0)
+            try:
+                writer.add_document(
+                        id = item['id'],
+                        kind = 'gdoc',
+                        created_time = created_time,
+                        modified_time = modified_time,
+                        indexed_time = indexed_time,
+                        title = item['name'],
+                        url = item['webViewLink'],
+                        mimetype = mimetype,
+                        owner_email = item['owners'][0]['emailAddress'],
+                        owner_name = item['owners'][0]['displayName'],
+                        group='',
+                        repo_name='',
+                        repo_url='',
+                        github_user='',
+                        issue_title='',
+                        issue_url='',
+                        content = content
+                )
+            except ValueError as e:
+                print(repr(e))
+                print(" > XXXXXX Failed to index Google Drive file \"%s\""%(item['name']))
 
 
         else:
@@ -314,7 +347,7 @@ class Search:
                 )
                 assert output == ""
             except RuntimeError:
-                print(" > XXXXXX Failed to index document \"%s\""%(item['name']))
+                print(" > XXXXXX Failed to index Google Drive document \"%s\""%(item['name']))
 
 
             # If export was successful, read contents of markdown
@@ -342,24 +375,33 @@ class Search:
             else:
                 print(" > Creating a new record")
 
-            writer.add_document(
-                    id = item['id'],
-                    kind = 'gdoc',
-                    created_time = item['createdTime'],
-                    modified_time = item['modifiedTime'],
-                    indexed_time = datetime.now().replace(microsecond=0).isoformat(),
-                    title = item['name'],
-                    url = item['webViewLink'],
-                    mimetype = mimetype,
-                    owner_email = item['owners'][0]['emailAddress'],
-                    owner_name = item['owners'][0]['displayName'],
-                    repo_name='',
-                    repo_url='',
-                    github_user='',
-                    issue_title='',
-                    issue_url='',
-                    content = content
-            )
+            try:
+                created_time = dateutil.parser.parse(item['createdTime'])
+                modified_time = dateutil.parser.parse(item['modifiedTime'])
+                indexed_time = datetime.now()
+                writer.add_document(
+                        id = item['id'],
+                        kind = 'gdoc',
+                        created_time = created_time,
+                        modified_time = modified_time,
+                        indexed_time = indexed_time,
+                        title = item['name'],
+                        url = item['webViewLink'],
+                        mimetype = mimetype,
+                        owner_email = item['owners'][0]['emailAddress'],
+                        owner_name = item['owners'][0]['displayName'],
+                        group='',
+                        repo_name='',
+                        repo_url='',
+                        github_user='',
+                        issue_title='',
+                        issue_url='',
+                        content = content
+                )
+            except ValueError as e:
+                print(repr(e))
+                print(" > XXXXXX Failed to index Google Drive file \"%s\""%(item['name']))
+
 
 
 
@@ -393,31 +435,36 @@ class Search:
                 issue_comment_content += comment.body.rstrip()
                 issue_comment_content += "\n"
 
-        # Now create the actual search index record
-        created_time = clean_timestamp(issue.created_at)
-        modified_time = clean_timestamp(issue.updated_at)
-        indexed_time = clean_timestamp(datetime.now())
-
+        # Now create the actual search index record.
         # Add one document per issue thread,
         # containing entire text of thread.
-        writer.add_document(
-                id = issue.html_url,
-                kind = 'issue',
-                created_time = created_time,
-                modified_time = modified_time,
-                indexed_time = indexed_time,
-                title = issue.title,
-                url = issue.html_url,
-                mimetype='',
-                owner_email='',
-                owner_name='',
-                repo_name = repo_name,
-                repo_url = repo_url,
-                github_user = issue.user.login,
-                issue_title = issue.title,
-                issue_url = issue.html_url,
-                content = issue_comment_content
-        )
+
+        created_time = issue.created_at
+        modified_time = issue.updated_at
+        indexed_time = datetime.now()
+        try:
+            writer.add_document(
+                    id = issue.html_url,
+                    kind = 'issue',
+                    created_time = created_time,
+                    modified_time = modified_time,
+                    indexed_time = indexed_time,
+                    title = issue.title,
+                    url = issue.html_url,
+                    mimetype='',
+                    owner_email='',
+                    owner_name='',
+                    group='',
+                    repo_name = repo_name,
+                    repo_url = repo_url,
+                    github_user = issue.user.login,
+                    issue_title = issue.title,
+                    issue_url = issue.html_url,
+                    content = issue_comment_content
+            )
+        except ValueError as e:
+            print(repr(e))
+            print(" > XXXXXX Failed to index Github issue \"%s\""%(issue.title))
 
 
 
@@ -447,7 +494,8 @@ class Search:
             print(" > XXXXXXXX Failed to find file info.")
             return
 
-        indexed_time = clean_timestamp(datetime.now())
+
+        indexed_time = datetime.now()
 
         if fext in MARKDOWN_EXTS:
             print("Indexing markdown doc %s from repo %s"%(fname,repo_name))
@@ -476,24 +524,31 @@ class Search:
             usable_url = "https://github.com/%s/blob/master/%s"%(repo_name, fpath)
 
             # Now create the actual search index record
-            writer.add_document(
-                    id = fsha,
-                    kind = 'markdown',
-                    created_time = '',
-                    modified_time = '',
-                    indexed_time = indexed_time,
-                    title = fname,
-                    url = usable_url,
-                    mimetype='',
-                    owner_email='',
-                    owner_name='',
-                    repo_name = repo_name,
-                    repo_url = repo_url,
-                    github_user = '',
-                    issue_title = '',
-                    issue_url = '',
-                    content = content
-            )
+            try:
+                writer.add_document(
+                        id = fsha,
+                        kind = 'markdown',
+                        created_time = None,
+                        modified_time = None,
+                        indexed_time = indexed_time,
+                        title = fname,
+                        url = usable_url,
+                        mimetype='',
+                        owner_email='',
+                        owner_name='',
+                        group='',
+                        repo_name = repo_name,
+                        repo_url = repo_url,
+                        github_user = '',
+                        issue_title = '',
+                        issue_url = '',
+                        content = content
+                )
+            except ValueError as e:
+                print(repr(e))
+                print(" > XXXXXX Failed to index Github markdown file \"%s\""%(fname))
+
+
 
         else:
             print("Indexing github file %s from repo %s"%(fname,repo_name))
@@ -501,24 +556,29 @@ class Search:
             key = fname+"_"+fsha
 
             # Now create the actual search index record
-            writer.add_document(
-                    id = key,
-                    kind = 'ghfile',
-                    created_time = '',
-                    modified_time = '',
-                    indexed_time = indexed_time,
-                    title = fname,
-                    url = repo_url,
-                    mimetype='',
-                    owner_email='',
-                    owner_name='',
-                    repo_name = repo_name,
-                    repo_url = repo_url,
-                    github_user = '',
-                    issue_title = '',
-                    issue_url = '',
-                    content = ''
-            )
+            try:
+                writer.add_document(
+                        id = key,
+                        kind = 'ghfile',
+                        created_time = None,
+                        modified_time = None,
+                        indexed_time = indexed_time,
+                        title = fname,
+                        url = repo_url,
+                        mimetype='',
+                        owner_email='',
+                        owner_name='',
+                        group='',
+                        repo_name = repo_name,
+                        repo_url = repo_url,
+                        github_user = '',
+                        issue_title = '',
+                        issue_url = '',
+                        content = ''
+                )
+            except ValueError as e:
+                print(repr(e))
+                print(" > XXXXXX Failed to index Github file \"%s\""%(fname))
 
 
 
@@ -529,30 +589,84 @@ class Search:
 
     def add_emailthread(self, writer, d, config, update=True):
         """
-        Use a Github file API record to add a filename
-        to the search index.
+        Use a Groups.io email thread record to add 
+        an email thread to the search index.
         """
-        indexed_time = clean_timestamp(datetime.now())
+        if 'created_time' in d.keys() and d['created_time'] is not None:
+            created_time = d['created_time']
+        else:
+            created_time = None
+
+        if 'modified_time' in d.keys() and d['modified_time'] is not None:
+            modified_time = d['modified_time']
+        else:
+            modified_time = None
+
+        indexed_time = datetime.now()
 
         # Now create the actual search index record
-        writer.add_document(
-                id = d['permalink'],
-                kind = 'emailthread',
-                created_time = '',
-                modified_time = '',
-                indexed_time = indexed_time,
-                title = d['subject'],
-                url = d['permalink'],
-                mimetype='',
-                owner_email='',
-                owner_name=d['original_sender'],
-                repo_name = '',
-                repo_url = '',
-                github_user = '',
-                issue_title = '',
-                issue_url = '',
-                content = d['content']
-        )
+        try:
+            writer.add_document(
+                    id = d['permalink'],
+                    kind = 'emailthread',
+                    created_time = created_time,
+                    modified_time = modified_time,
+                    indexed_time = indexed_time,
+                    title = d['subject'],
+                    url = d['permalink'],
+                    mimetype='',
+                    owner_email='',
+                    owner_name=d['original_sender'],
+                    group=d['subgroup'],
+                    repo_name = '',
+                    repo_url = '',
+                    github_user = '',
+                    issue_title = '',
+                    issue_url = '',
+                    content = d['content']
+            )
+        except ValueError as e:
+            print(repr(e))
+            print(" > XXXXXX Failed to index Groups.io thread \"%s\""%(d['subject']))
+
+
+    # ------------------------------
+    # Add a single disqus comment thread
+    # to the search index.
+
+    def add_disqusthread(self, writer, d, config, update=True):
+        """
+        Use a disqus comment thread record
+        to add a disqus comment thread to the
+        search index.
+        """
+        indexed_time = datetime.now()
+
+        # created_time is already a timestamp
+
+        # Now create the actual search index record
+        try:
+            writer.add_document(
+                    id = d['id'],
+                    kind = 'disqus',
+                    created_time = d['created_time'],
+                    modified_time = None,
+                    indexed_time = indexed_time,
+                    title = d['title'],
+                    url = d['link'],
+                    mimetype='',
+                    owner_email='',
+                    owner_name='',
+                    repo_name = '',
+                    repo_url = '',
+                    github_user = '',
+                    issue_title = '',
+                    issue_url = '',
+                    content = d['content']
+            )
+        except ValueError as e:
+            print(repr(e))
+            print(" > XXXXXX Failed to index Disqus comment thread \"%s\""%(d['title']))
 
 
 
@@ -580,9 +694,8 @@ class Search:
         # Updated algorithm:
         # - get set of indexed ids
         # - get set of remote ids
-        # - drop indexed ids not in remote ids
+        # - drop all indexed ids
         # - index all remote ids
-        # - add hash check in add_
 
 
         # Get the set of indexed ids:
@@ -631,10 +744,10 @@ class Search:
                 full_items[f['id']] = f
             
             ## Shorter:
-            #break
-            # Longer:
-            if nextPageToken is None:
-                break
+            break
+            ## Longer:
+            #if nextPageToken is None:
+            #    break
 
 
         writer = self.ix.writer()
@@ -642,34 +755,41 @@ class Search:
         temp_dir = tempfile.mkdtemp(dir=os.getcwd())
         print("Temporary directory: %s"%(temp_dir))
 
+        try:
+
+            # Drop any id in indexed_ids
+            # not in remote_ids
+            drop_ids = indexed_ids - remote_ids
+            for drop_id in drop_ids:
+                writer.delete_by_term('id',drop_id)
 
 
-        # Drop any id in indexed_ids
-        # not in remote_ids
-        drop_ids = indexed_ids - remote_ids
-        for drop_id in drop_ids:
-            writer.delete_by_term('id',drop_id)
+            # Update any id in indexed_ids
+            # and in remote_ids
+            update_ids = indexed_ids & remote_ids
+            for update_id in update_ids:
+                # cop out
+                writer.delete_by_term('id',update_id)
+                item = full_items[update_id]
+                self.add_drive_file(writer, item, temp_dir, config, update=True)
+                count += 1
 
 
-        # Update any id in indexed_ids
-        # and in remote_ids
-        update_ids = indexed_ids & remote_ids
-        for update_id in update_ids:
-            # cop out
-            writer.delete_by_term('id',update_id)
-            item = full_items[update_id]
-            self.add_drive_file(writer, item, temp_dir, config, update=True)
-            count += 1
-
-
-        # Add any id not in indexed_ids
-        # and in remote_ids
-        add_ids = remote_ids - indexed_ids
-        for add_id in add_ids:
-            item = full_items[add_id]
-            self.add_drive_file(writer, item, temp_dir, config, update=False)
-            count += 1
+            # Add any id not in indexed_ids
+            # and in remote_ids
+            add_ids = remote_ids - indexed_ids
+            for add_id in add_ids:
+                item = full_items[add_id]
+                self.add_drive_file(writer, item, temp_dir, config, update=False)
+                count += 1
 
+        except Exception as e:
+            print("ERROR: While adding Google Drive files to search index")
+            print("-"*40)
+            print(repr(e))
+            print("-"*40)
+            print("Continuing...")
+            pass
 
         print("Cleaning temporary directory: %s"%(temp_dir))
         subprocess.call(['rm','-fr',temp_dir])
@@ -686,12 +806,6 @@ class Search:
         Update the search index using a collection of 
         Github repo issues and comments.
         """
-        # Updated algorithm:
-        # - get set of indexed ids
-        # - get set of remote ids
-        # - drop indexed ids not in remote ids
-        # - index all remote ids
-
         # Get the set of indexed ids:
         # ------
         indexed_issues = set()
@@ -772,12 +886,6 @@ class Search:
         files (and, separately, Markdown files) from 
         a Github repo.
         """
-        # Updated algorithm:
-        # - get set of indexed ids
-        # - get set of remote ids
-        # - drop indexed ids not in remote ids
-        # - index all remote ids
-
         # Get the set of indexed ids:
         # ------
         indexed_ids = set()
@@ -896,12 +1004,6 @@ class Search:
 
         RELEASE THE SPIDER!!!
         """
-        # Algorithm:
-        # - get set of indexed ids
-        # - get set of remote ids
-        # - drop indexed ids not in remote ids
-        # - index all remote ids
-
         # Get the set of indexed ids:
         # ------
         indexed_ids = set()
@@ -919,16 +1021,17 @@ class Search:
         # ask spider to crawl the archives
         spider.crawl_group_archives()
 
-        # now spider.archives is a list of dictionaries
-        # that each represent a thread:
-        #   thread = {
-        #           'permalink' : permalink,
-        #           'subject' : subject,
-        #           'original_sender' : original_sender,
-        #           'content' : full_content
-        #   }
+        # now spider.archives is a dictionary
+        # with one key per thread ID,
+        # and a value set to the payload:
+        #   '<thread-id>'  : {
+        #                       'permalink' : permalink,
+        #                       'subject' : subject,
+        #                       'original_sender' : original_sender,
+        #                       'content' : full_content
+        #                    }
         #
-        # It is hard to reliablly extract more information
+        # It is hard to reliably extract more information
         # than that from the email thread.
 
         writer = self.ix.writer()
@@ -958,6 +1061,75 @@ class Search:
         print("Done, updated %d Groups.io email threads in the index" % count)
 
 
+
+    # ------------------------------
+    # Disqus Comments
+
+
+    def update_index_disqus(self, disqus_token, config):
+        """
+        Update the search index using a collection of 
+        Disqus comment threads from the dcppc-internal 
+        forum.
+        """
+        # Updated algorithm:
+        # - get set of indexed ids
+        # - get set of remote ids
+        # - drop all indexed ids
+        # - index all remote ids
+
+        # Get the set of indexed ids:
+        # --------------------
+        indexed_ids = set()
+        p = QueryParser("kind", schema=self.ix.schema)
+        q = p.parse("disqus")
+        with self.ix.searcher() as s:
+            results = s.search(q,limit=None)
+            for result in results:
+                indexed_ids.add(result['id'])
+
+        # Get the set of remote ids:
+        # ------
+        spider = DisqusCrawler(disqus_token,'dcppc-internal')
+
+        # ask spider to crawl disqus comments
+        spider.crawl_threads()
+
+        # spider.comments will be a dictionary
+        # with keys as thread IDs and values as
+        # a dictionary item
+
+        writer = self.ix.writer()
+        count = 0
+
+        # archives is a dictionary
+        # keys are IDs (urls)
+        # values are dictionaries
+        threads = spider.get_threads()
+
+        # Start by collecting all the things
+        remote_ids = set()
+        for k in threads.keys():
+            remote_ids.add(k)
+
+        # drop indexed_ids
+        for drop_id in indexed_ids:
+            writer.delete_by_term('id',drop_id)
+
+        # add remote_ids
+        for add_id in remote_ids:
+            item = threads[add_id]
+            self.add_disqusthread(writer, item, config, update=False)
+            count += 1
+
+        writer.commit()
+        print("Done, updated %d Disqus comment threads in the index" % count)
+
+
+
+
+
+
     # ---------------------------------
     # Search results bundler
 
@@ -1044,6 +1216,7 @@ class Search:
                 "ghfile" : None,
                 "markdown" : None,
                 "emailthread" : None,
+                "disqus" : None,
                 "total" : None
         }
         for key in counts.keys():
@@ -1074,7 +1247,9 @@ class Search:
         elif doctype=='issue':
             item_keys = ['title','repo_name','repo_url','url','created_time','modified_time']
         elif doctype=='emailthread':
-            item_keys = ['title','owner_name','url']
+            item_keys = ['title','owner_name','url','group','created_time','modified_time']
+        elif doctype=='disqus':
+            item_keys = ['title','created_time','url']
         elif doctype=='ghfile':
             item_keys = ['title','repo_name','repo_url','url']
         elif doctype=='markdown':
@@ -1091,11 +1266,7 @@ class Search:
             for r in results:
                 d = {}
                 for k in item_keys:
-                    if k=='created_time' or k=='modified_time':
-                        #d[k] = r[k]
-                        d[k] = dateutil.parser.parse(r[k]).strftime("%Y-%m-%d")
-                    else:
-                        d[k] = r[k]
+                    d[k] = r[k]
                 json_results.append(d)
 
         return json_results
@@ -1108,7 +1279,16 @@ class Search:
             query_string = " ".join(query_list)
             query = None
             if ":" in query_string:
-                query = QueryParser("content", self.schema).parse(query_string)
+
+                #query = QueryParser("content", 
+                #                    self.schema
+                #).parse(query_string)
+                query = QueryParser("content", 
+                                    self.schema,
+                                    termclass=query.Variations
+                )
+                query.add_plugin(DateParserPlugin(free=True))
+                query = query.parse(query_string)
             elif len(fields) == 1 and fields[0] == "filename":
                 pass
             elif len(fields) == 2:
@@ -1116,9 +1296,12 @@ class Search:
             else:
                 # If the user does not specify a field,
                 # these are the fields that are actually searched
-                fields = ['title', 'content','owner_name','owner_email','url']
+                fields = ['title', 'content','owner_name','owner_email','url','created_date','modified_date']
             if not query:
-                query = MultifieldParser(fields, schema=self.ix.schema).parse(query_string)
+                query = MultifieldParser(fields, schema=self.ix.schema)
+                query.add_plugin(DateParserPlugin(free=True))
+                query = query.parse(query_string)
+                #query = MultifieldParser(fields, schema=self.ix.schema).parse(query_string) 
             parsed_query = "%s" % query
             print("query: %s" % parsed_query)
             results = searcher.search(query, terms=False, scored=True, groupedby="kind")

disqus_util.py

@@ -0,0 +1,154 @@
+import os, re
+import requests
+import json
+import dateutil.parser
+
+from pprint import pprint
+
+"""
+Convenience class wrapper for Disqus comments.
+
+This requires that the user provide either their
+API OAuth application credentials (in which case
+a user needs to authenticate with the application
+so it can access the comments that they can see)
+or user credentials from a previous login.
+"""
+
+class DisqusCrawler(object):
+
+    def __init__(self,
+                 credentials,
+                 group_name):
+
+        self.credentials = credentials
+        self.group_name = group_name
+        self.crawled_comments = False
+        self.threads = None
+
+
+    def get_threads(self):
+        """
+        Return a list of dictionaries containing
+        entries for each comment thread in the given 
+        disqus forum.
+        """
+        return self.threads
+
+
+    def crawl_threads(self):
+        """
+        This will use the API to get every thread,
+        and will iterate through every thread to 
+        get every comment thread. 
+        """
+        # The money shot
+        threads = {}
+
+        # list all threads
+        list_threads_url = 'https://disqus.com/api/3.0/threads/list.json'
+
+        # list all posts (comments)
+        list_posts_url = 'https://disqus.com/api/3.0/threads/listPosts.json'
+
+        base_params = dict(
+                api_key=self.credentials,
+                forum=self.group_name
+        )
+
+        # prepare url params
+        params = {}
+        for k in base_params.keys():
+            params[k] = base_params[k]
+
+        # make api call (first loop in fencepost)
+        results = requests.request('GET', list_threads_url, params=params).json()
+        cursor = results['cursor']
+        responses = results['response']
+
+        while True:
+
+            for response in responses:
+                if '127.0.0.1' not in response['link'] and 'localhost' not in response['link']:
+
+                    # Save thread info
+                    thread_id = response['id']
+                    thread_count = response['posts']
+
+                    print("Working on thread %s (%d posts)"%(thread_id,thread_count))
+                    if thread_count > 0:
+
+                        # prepare url params
+                        params_comments = {}
+                        for k in base_params.keys():
+                            params_comments[k] = base_params[k]
+
+                        params_comments['thread'] = thread_id
+
+                        # make api call
+                        results_comments = requests.request('GET', list_posts_url, params=params_comments).json()
+                        cursor_comments = results_comments['cursor']
+                        responses_comments = results_comments['response']
+
+                        # Save comments for this thread
+                        thread_comments = []
+
+                        while True:
+                            for comment in responses_comments:
+                                # Save comment info
+                                print("    + %s"%(comment['message']))
+                                thread_comments.append(comment['message'])
+                       
+                            if cursor_comments['hasNext']:
+                       
+                                # Prepare for the next URL call
+                                params_comments = {}
+                                for k in base_params.keys():
+                                    params_comments[k] = base_params[k]
+                                params_comments['thread'] = thread_id
+                                params_comments['cursor'] = cursor_comments['next']
+                       
+                                # Make the next URL call
+                                results_comments = requests.request('GET', list_posts_url, params=params_comments).json()
+                                cursor_comments = results_comments['cursor']
+                                responses_comments = results_comments['response']
+                       
+                            else:
+                               break
+
+                        link = response['link']
+                        clean_link = re.sub('data-commons.us','nihdatacommons.us',link)
+                        clean_link += "#disqus_comments"
+
+                        # Finished working on thread.
+
+                        # We need to make this value a dictionary
+                        thread_info = dict(
+                                id = response['id'],
+                                created_time = dateutil.parser.parse(response['createdAt']),
+                                title = response['title'],
+                                forum = response['forum'],
+                                link = clean_link,
+                                content = "\n\n-----".join(thread_comments)
+                        )
+                        threads[thread_id] = thread_info
+
+
+            if 'hasNext' in cursor.keys() and cursor['hasNext']:
+
+                # Prepare for next URL call
+                params = {}
+                for k in base_params.keys():
+                    params[k] = base_params[k]
+                params['cursor'] = cursor['next']
+
+                # Make the next URL call
+                results = requests.request('GET', list_threads_url, params=params).json()
+                cursor = results['cursor']
+                responses = results['response']
+
+            else:
+                break
+
+        self.threads = threads
+

groupsio_util.py

@@ -1,5 +1,7 @@
 import requests, os, re
 from bs4 import BeautifulSoup
+import dateutil.parser
+import datetime
 
 class GroupsIOException(Exception):
     pass
@@ -64,7 +66,7 @@ class GroupsIOArchivesCrawler(object):
 
             ## Short circuit
             ## for debugging purposes
-            #break
+            break
 
         return subgroups
 
@@ -251,7 +253,7 @@ class GroupsIOArchivesCrawler(object):
             subject = soup.find('title').text
 
             # Extract information for the schema:
-            # - permalink for thread (done)
+            # - permalink for thread (done above)
             # - subject/title (done)
             # - original sender email/name (done)
             # - content (done)
@@ -266,11 +268,35 @@ class GroupsIOArchivesCrawler(object):
                     pass
                 else:
                     # found an email!
-                    # this is a maze, thanks groups.io
+                    # this is a maze, not amazing.
+                    # thanks groups.io!
                     td = tr.find('td')
-                    divrow = td.find('div',{'class':'row'}).find('div',{'class':'pull-left'})
+
+                    sender_divrow = td.find('div',{'class':'row'})
+                    sender_divrow = sender_divrow.find('div',{'class':'pull-left'})
                     if (i+1)==1:
-                        original_sender = divrow.text.strip()
+                        original_sender = sender_divrow.text.strip()
+
+                    date_divrow = td.find('div',{'class':'row'})
+                    date_divrow = date_divrow.find('div',{'class':'pull-right'})
+                    date_divrow = date_divrow.find('font',{'class':'text-muted'})
+                    date_divrow = date_divrow.find('script').text
+                    try:
+                        time_seconds = re.search(' [0-9]{1,} ',date_divrow).group(0)
+                        time_seconds = time_seconds.strip()
+                        # Thanks groups.io for the weird date formatting
+                        time_seconds = time_seconds[:10]
+                        mmicro_seconds = time_seconds[10:]
+                        if (i+1)==1:
+                            created_time  = datetime.datetime.utcfromtimestamp(int(time_seconds))
+                            modified_time = datetime.datetime.utcfromtimestamp(int(time_seconds))
+                        else:
+                            modified_time = datetime.datetime.utcfromtimestamp(int(time_seconds))
+
+                    except AttributeError:
+                        created_time = None
+                        modified_time = None
+
                     for div in td.find_all('div'):
                         if div.has_attr('id'):
 
@@ -299,7 +325,10 @@ class GroupsIOArchivesCrawler(object):
 
             thread = {
                     'permalink' : permalink,
+                    'created_time' : created_time,
+                    'modified_time' : modified_time,
                     'subject' : subject,
+                    'subgroup' : subgroup_name,
                     'original_sender' : original_sender,
                     'content' : full_content
             }
@@ -324,11 +353,13 @@ class GroupsIOArchivesCrawler(object):
 
         results = []
         for row in rows:
-            # We don't care about anything except title and ugly link
+            # This is where we extract
+            # a list of thread titles 
+            # and corresponding links.
             subject = row.find('span',{'class':'subject'})
             title = subject.get_text()
             link = row.find('a')['href']
-            #print(title)
+
             results.append((title,link))
 
         return results

hypothesis_util.py

@@ -0,0 +1,89 @@
+import requests
+import json
+import os
+
+def get_headers():
+
+    if 'HYPOTHESIS_TOKEN' in os.environ:
+        token = os.environ['HYPOTHESIS_TOKEN']
+    else:
+        raise Exception("Need to specify Hypothesis token with HYPOTHESIS_TOKEN env var")
+    
+    auth_header = 'Bearer %s'%(token)
+
+    return {'Authorization': auth_header}
+
+
+def basic_auth():
+
+    url = ' https://hypothes.is/api'
+
+    # Get the authorization header
+    headers = get_headers()
+
+    # Make the request
+    response = requests.get(url, headers=headers)
+
+    if response.status_code==200:
+
+        # Interpret results as JSON
+        dat = response.json()
+        print(json.dumps(dat, indent=4))
+
+    else:
+
+        print("Response status code was not OK: %d"%(response.status_code))
+
+
+def list_annotations():
+    # kEaohJC9Eeiy_UOozkpkyA
+
+    url = 'https://hypothes.is/api/annotations/kEaohJC9Eeiy_UOozkpkyA'
+
+    # Get the authorization header
+    headers = get_headers()
+
+    # Make the request
+    response = requests.get(url, headers=headers)
+
+    if response.status_code==200:
+
+        # Interpret results as JSON
+        dat = response.json()
+        print(json.dumps(dat, indent=4))
+
+    else:
+
+        print("Response status code was not OK: %d"%(response.status_code))
+
+
+def search_annotations():
+    url = ' https://hypothes.is/api/search'
+
+    # Get the authorization header
+    headers = get_headers()
+
+    # Set query params
+    params = dict(
+            url = '*pilot.nihdatacommons.us*',
+            limit = 200
+    )
+    #http://pilot.nihdatacommons.us/organize/CopperInternalDeliveryWorkFlow/',
+
+    # Make the request
+    response = requests.get(url, headers=headers, params=params)
+
+    if response.status_code==200:
+
+        # Interpret results as JSON
+        dat = response.json()
+        print(json.dumps(dat, indent=4))
+
+    else:
+
+        print("Response status code was not OK: %d"%(response.status_code))
+
+
+if __name__=="__main__":
+    search_annotations()
+

static/master_list.js

@@ -22,6 +22,7 @@ var initIssuesTable = false;
 var initGhfilesTable = false;
 var initMarkdownTable = false;
 var initEmailthreadsTable = false;
+var initDisqusTable = false;
 
 $(document).ready(function() {
     var url_string = document.location.toString();
@@ -32,10 +33,6 @@ $(document).ready(function() {
         load_gdoc_table();
         var divList = $('div#collapseDrive').addClass('in');
 
-    } else if (d==='emailthread') {
-        load_emailthreads_table();
-        var divList = $('div#collapseThreads').addClass('in');
-
     } else if (d==='issue') {
         load_issue_table();
         var divList = $('div#collapseIssues').addClass('in');
@@ -48,10 +45,37 @@ $(document).ready(function() {
         load_markdown_table();
         var divList = $('div#collapseMarkdown').addClass('in');
 
+    } else if (d==='emailthread') {
+        load_emailthreads_table();
+        var divList = $('div#collapseThreads').addClass('in');
+
+    } else if (d==='disqus') {
+        load_disqusthreads_table();
+        var divList = $('div#collapseDisqus').addClass('in');
+
     }
 });
 
 
+//////////////////////////////////
+// utility functions
+
+// https://stackoverflow.com/a/25275808
+function iso8601(date) {
+  var hours = date.getHours();
+  var minutes = date.getMinutes();
+  var ampm = hours >= 12 ? 'PM' : 'AM';
+  hours = hours % 12;
+  hours = hours ? hours : 12; // the hour '0' should be '12'
+  minutes = minutes < 10 ? '0'+minutes : minutes;
+  var strTime = hours + ':' + minutes + ' ' + ampm;
+  return date.getYear() + "-" + (date.getMonth()+1) + "-" + date.getDate() + "  " + strTime;
+}
+
+// https://stackoverflow.com/a/7390612
+var toType = function(obj) {
+  return ({}).toString.call(obj).match(/\s([a-zA-Z]+)/)[1].toLowerCase()
+}
 
 //////////////////////////////////
 // API-to-Table Functions
@@ -77,9 +101,9 @@ function load_gdoc_table(){
     if(!initGdocTable) {
         var divList = $('div#collapseDrive').attr('class');
         if (divList.indexOf('in') !== -1) {
-            console.log('Closing Google Drive master list');
+            //console.log('Closing Google Drive master list');
         } else { 
-            console.log('Opening Google Drive master list');
+            //console.log('Opening Google Drive master list');
 
             $.getJSON("/list/gdoc", function(result){
 
@@ -125,7 +149,7 @@ function load_gdoc_table(){
 
                 initGdocTable = true
             });
-            console.log('Finished loading Google Drive master list');
+            //console.log('Finished loading Google Drive master list');
         }
     }
 }
@@ -137,9 +161,9 @@ function load_issue_table(){
     if(!initIssuesTable) {
         var divList = $('div#collapseIssues').attr('class');
         if (divList.indexOf('in') !== -1) {
-            console.log('Closing Github issues master list');
+            //console.log('Closing Github issues master list');
         } else { 
-            console.log('Opening Github issues master list');
+            //console.log('Opening Github issues master list');
 
             $.getJSON("/list/issue", function(result){
                 var r = new Array(), j = -1, size=result.length;
@@ -183,7 +207,7 @@ function load_issue_table(){
 
                 initIssuesTable = true;
             });
-            console.log('Finished loading Github issues master list');
+            //console.log('Finished loading Github issues master list');
         }
     }
 }
@@ -195,13 +219,13 @@ function load_ghfile_table(){
     if(!initGhfilesTable) {
         var divList = $('div#collapseFiles').attr('class');
         if (divList.indexOf('in') !== -1) {
-            console.log('Closing Github files master list');
+            //console.log('Closing Github files master list');
         } else { 
-            console.log('Opening Github files master list');
+            //console.log('Opening Github files master list');
 
             $.getJSON("/list/ghfile", function(result){
-                console.log("-----------");
-                console.log(result);
+                //console.log("-----------");
+                //console.log(result);
                 var r = new Array(), j = -1, size=result.length;
                 r[++j] = '<thead>'
                 r[++j] = '<tr class="header-row">';
@@ -237,7 +261,7 @@ function load_ghfile_table(){
 
                 initGhfilesTable = true;
             });
-            console.log('Finished loading Github file list');
+            //console.log('Finished loading Github file list');
         }
     }
 }
@@ -249,9 +273,9 @@ function load_markdown_table(){
     if(!initMarkdownTable) { 
         var divList = $('div#collapseMarkdown').attr('class');
         if (divList.indexOf('in') !== -1) {
-            console.log('Closing Github markdown master list');
+            //console.log('Closing Github markdown master list');
         } else { 
-            console.log('Opening Github markdown master list');
+            //console.log('Opening Github markdown master list');
 
             $.getJSON("/list/markdown", function(result){
                 var r = new Array(), j = -1, size=result.length;
@@ -289,7 +313,7 @@ function load_markdown_table(){
 
                 initMarkdownTable = true;
             });
-            console.log('Finished loading Markdown list');
+            //console.log('Finished loading Markdown list');
         }
     }
 }
@@ -302,16 +326,18 @@ function load_emailthreads_table(){
     if(!initEmailthreadsTable) { 
         var divList = $('div#collapseThreads').attr('class');
         if (divList.indexOf('in') !== -1) {
-            console.log('Closing Groups.io email threads master list');
+            //console.log('Closing Groups.io email threads master list');
         } else { 
-            console.log('Opening Groups.io email threads master list');
+            //console.log('Opening Groups.io email threads master list');
     
             $.getJSON("/list/emailthread", function(result){
                 var r = new Array(), j = -1, size=result.length;
                 r[++j] = '<thead>'
                 r[++j] = '<tr class="header-row">';
-                r[++j] = '<th width="70%">Topic</th>';
-                r[++j] = '<th width="30%">Started By</th>';
+                r[++j] = '<th width="60%">Topic</th>';
+                r[++j] = '<th width="15%">Started By</th>';
+                r[++j] = '<th width="15%">Date</th>';
+                r[++j] = '<th width="10%">Mailing List</th>';
                 r[++j] = '</tr>';
                 r[++j] = '</thead>'
                 r[++j] = '<tbody>'
@@ -322,6 +348,10 @@ function load_emailthreads_table(){
                     r[++j] = '</a>'
                     r[++j] = '</td><td>';
                     r[++j] = result[i]['owner_name'];
+                    r[++j] = '</td><td>';
+                    r[++j] = result[i]['created_time'];
+                    r[++j] = '</td><td>';
+                    r[++j] = result[i]['group'];
                     r[++j] = '</td></tr>';
                 }
                 r[++j] = '</tbody>'
@@ -340,7 +370,57 @@ function load_emailthreads_table(){
 
                 initEmailthreadsTable = true;
             });
-            console.log('Finished loading Groups.io email threads list');
+            //console.log('Finished loading Groups.io email threads list');
+        }
+    }
+}
+
+// ------------------------
+// Disqus Comment Threads
+
+function load_disqusthreads_table(){
+    if(!initEmailthreadsTable) { 
+        var divList = $('div#collapseDisqus').attr('class');
+        if (divList.indexOf('in') !== -1) {
+            //console.log('Closing Disqus comment threads master list');
+        } else { 
+            //console.log('Opening Disqus comment threads master list');
+    
+            $.getJSON("/list/disqus", function(result){
+                var r = new Array(), j = -1, size=result.length;
+                r[++j] = '<thead>'
+                r[++j] = '<tr class="header-row">';
+                r[++j] = '<th width="70%">Page Title</th>';
+                r[++j] = '<th width="30%">Created</th>';
+                r[++j] = '</tr>';
+                r[++j] = '</thead>'
+                r[++j] = '<tbody>'
+                for (var i=0; i<size; i++){
+                    r[++j] ='<tr><td>';
+                    r[++j] = '<a href="' + result[i]['url'] + '" target="_blank">'
+                    r[++j] = result[i]['title'];
+                    r[++j] = '</a>'
+                    r[++j] = '</td><td>';
+                    r[++j] = result[i]['created_time'];
+                    r[++j] = '</td></tr>';
+                }
+                r[++j] = '</tbody>'
+
+                // Construct names of id tags
+                var doctype = 'disqus';
+                var idlabel = '#' + doctype + '-master-list';
+                var filtlabel = idlabel + '_filter';
+
+                // Initialize the DataTable
+                $(idlabel).html(r.join(''));
+                $(idlabel).DataTable({
+                    responsive: true,
+                    lengthMenu: [50,100,250,500]
+                });
+
+                initDisqusTable = true;
+            });
+            console.log('Finished loading Disqus comment threads list');
         }
     }
 }

static/search_list.js

@@ -31,7 +31,7 @@ $(document).ready(function() {
               aTargets : [2]
             }
         ],
-        lengthMenu: [50,100,250,500]
+        lengthMenu: [10,20,50,100]
     });
 
     console.log('Finished loading search results list');

static/style.css

@@ -86,6 +86,14 @@ div.container {
 }
 
 /* badges for number of docs indexed */
+span.results-count {
+    background-color: #555;
+}
+
+span.indexing-count {
+    background-color: #337ab7;
+}
+
 span.badge {
     vertical-align: text-bottom;
 }
@@ -126,7 +134,7 @@ li.search-group-item {
 }
 
 div.url {
-    background-color: rgba(86,61,124,.15);
+    background-color: rgba(40,40,60,.15);
     padding: 8px;
 }
 
@@ -192,7 +200,7 @@ table {
 
 .info, .last-searches {
     color: gray;
-    font-size: 12px;
+    /*font-size: 12px;*/
     font-family: Arial, serif;
 }
 
@@ -202,27 +210,27 @@ table {
 
 div.tags a, td.tag-cloud a {
     color: #b56020;
-    font-size: 12px;
+    /*font-size: 12px;*/
 }
 
 td.tag-cloud, td.directories-cloud {
-    font-size: 12px;
+    /*font-size: 12px;*/
     color: #555555;
 }
 
 td.directories-cloud a {
-    font-size: 12px;
+    /*font-size: 12px;*/
     color: #377BA8;
 }
 
 div.path {
-    font-size: 12px;
+    /*font-size: 12px;*/
     color: #666666;
     margin-bottom: 3px;
 }
 
 div.path a {
-    font-size: 12px;
+    /*font-size: 12px;*/
     margin-right: 5px;
 }
 

templates/controlpanel.html

@@ -54,6 +54,8 @@
                             </p>  
                             <p><a href="{{ url_for('update_index',run_which='emailthreads') }}" class="btn btn-large btn-danger btn-reindex-type">Update Groups.io Email Threads Index</a>
                             </p> 
+                            <p><a href="{{ url_for('update_index',run_which='disqus') }}"       class="btn btn-large btn-danger btn-reindex-type">Update Disqus Comment Threads Index</a>
+                            </p> 
                         </div>
                     </div>
                 </div>

templates/flashed_messages.html

@@ -5,7 +5,7 @@
             <div class="alert alert-success alert-dismissible fade in">
                 <a href="#" class="close" data-dismiss="alert" aria-label="close">&times;</a>
                     {% for message in messages %}
-                        <p class="lead">{{ message }}</p>
+                        <p>{{ message }}</p>
                     {% endfor %}
             </div>
         </div>

templates/masterlist.html

@@ -9,8 +9,9 @@
     <div class="row">
 
     {#
-     # google drive files panel
-     #}
+    # google drive files panel
+    #}
+    <a name="gdoc"></a>
     <div class="row">
         <div class="panel">
             <div class="panel-group" id="accordionDrive" role="tablist" aria-multiselectable="true">
@@ -46,8 +47,9 @@
 
 
     {#
-     # github issue panel
-     #}
+    # github issue panel
+    #}
+    <a name="issue"></a>
     <div class="row">
         <div class="panel">
             <div class="panel-group" id="accordionIssues" role="tablist" aria-multiselectable="true">
@@ -85,8 +87,9 @@
 
 
     {#
-     # github file panel
-     #}
+    # github file panel
+    #}
+    <a name="ghfile"></a>
     <div class="row">
         <div class="panel">
             <div class="panel-group" id="accordionFiles" role="tablist" aria-multiselectable="true">
@@ -122,8 +125,9 @@
 
 
     {#
-     # gh markdown file panel
-     #}
+    # gh markdown file panel
+    #}
+    <a name="markdown"></a>
     <div class="row">
         <div class="panel">
             <div class="panel-group" id="accordionMarkdown" role="tablist" aria-multiselectable="true">
@@ -160,8 +164,9 @@
 
 
     {#
-     # groups.io
-     #}
+    # groups.io email threads
+    #}
+    <a name="emailthread"></a>
     <div class="row">
         <div class="panel">
             <div class="panel-group" id="accordionThreads" role="tablist" aria-multiselectable="true">
@@ -195,6 +200,42 @@
         </div>
     </div>
 
+    {#
+    # disqus comment threads
+    #}
+    <a name="disqus"></a>
+    <div class="row">
+        <div class="panel">
+            <div class="panel-group" id="accordionDisqus" role="tablist" aria-multiselectable="true">
+                <div class="panel panel-default">
+                    <div class="panel-heading" role="tab" id="disqus">
+
+                        <h2 class="masterlist-header">
+                            <a class="collapsed" 
+                                role="button"
+                                onClick="load_disqusthreads_table()"
+                                data-toggle="collapse" 
+                                data-parent="#accordionDisqus"
+                                href="#collapseDisqus" 
+                                aria-expanded="true"
+                                aria-controls="collapseDisqus">
+                                Disqus Comment Threads <small>indexed by centillion</small>
+                            </a>
+                        </h2>
+
+                    </div>
+                    <div id="collapseDisqus" class="panel-collapse collapse" role="tabpanel" 
+                        aria-labelledby="disqus">
+                        <div class="panel-body">
+                            <table class="table table-striped" id="disqus-master-list">
+
+                            </table>
+                        </div>
+                    </div>
+                </div>
+            </div>
+        </div>
+    </div>
 
 
 </div>

templates/search.html

@@ -52,8 +52,8 @@
                     <div class="container-fluid">
                         <div class="row">
                             <div class="col-xs-12 info">
-                                <b>Found:</b> <span class="badge">{{entries|length}}</span> results 
-                                out of <span class="badge">{{totals["total"]}}</span> total items indexed
+                                <b>Found:</b> <span class="badge results-count">{{entries|length}}</span> results 
+                                out of <span class="badge results-count">{{totals["total"]}}</span> total items indexed
                             </div>
                         </div>
                     </div>
@@ -67,35 +67,41 @@
                             <div class="col-xs-12 info">
                                 <b>Indexing:</b>
 
-                                <span class="badge">{{totals["gdoc"]}}</span>
-                                <a href="/master_list?doctype=gdoc">
+                                <span class="badge indexing-count">{{totals["gdoc"]}}</span>
+                                <a href="/master_list?doctype=gdoc#gdoc">
                                 Google Drive files
                                 </a>,
 
-                                <span class="badge">{{totals["issue"]}}</span>
-                                <a href="/master_list?doctype=issue">
+                                <span class="badge indexing-count">{{totals["issue"]}}</span>
+                                <a href="/master_list?doctype=issue#issue">
                                 Github issues
                                 </a>,
 
-                                <span class="badge">{{totals["ghfile"]}}</span>
-                                <a href="/master_list?doctype=ghfile">
+                                <span class="badge indexing-count">{{totals["ghfile"]}}</span>
+                                <a href="/master_list?doctype=ghfile#ghfile">
                                 Github files
                                 </a>,
 
-                                <span class="badge">{{totals["markdown"]}}</span>
-                                <a href="/master_list?doctype=markdown">
+                                <span class="badge indexing-count">{{totals["markdown"]}}</span>
+                                <a href="/master_list?doctype=markdown#markdown">
                                 Github Markdown files
                                 </a>,
 
-                                <span class="badge">{{totals["emailthread"]}}</span>
-                                <a href="/master_list?doctype=emailthread">
+                                <span class="badge indexing-count">{{totals["emailthread"]}}</span>
+                                <a href="/master_list?doctype=emailthread#emailthread">
                                 Groups.io email threads
+                                </a>,
+
+                                <span class="badge indexing-count">{{totals["disqus"]}}</span>
+                                <a href="/master_list?doctype=disqus#disqus">
+                                Disqus comment threads
                                 </a>
                             </div>
                         </div>
                 </div>
             </li>
 
+
         </ul>
     </div>
 </div>