split run all into part 1 and part 2

7 years ago · 088003afc4
2 changed files with 9 additions and 6 deletions
--- a/scripts/run_all_part1.sh
+++ b/scripts/run_all_part1.sh
@ -0,0 +1,8 @@
				@@ -0,0 +1,8 @@
+#!/bin/bash
+
+sudo ./install_singularity.sh 
+
+./install_pyenv.sh
+
+./install_snakemake 
+
--- a/scripts/run_all_part2.sh
+++ b/scripts/run_all_part2.sh
@ -1,11 +1,5 @@
				@@ -1,11 +1,5 @@
 #!/bin/bash

-sudo ./install_singularity.sh 
-
-./install_pyenv.sh
-
-./install_snakemake 
-
 ./prepare_biocontainers.sh

 ./get_sbt.sh
@ -14,3 +8,4 @@ sudo ./install_singularity.sh
				@@ -14,3 +8,4 @@ sudo ./install_singularity.sh

 ./calculate_signatures.sh

+