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• 04b44a3e80
  Merge pull request #13 from fp9695253/master master Chaz Reid 2018-12-09 10:30:18 -08:00
• 812ee7c43f
  Update make_user.sh Chaz Reid 2018-12-09 10:29:41 -08:00
• 0c4afe6d54 Merge branch 'master' of github.com:dahak-metagenomics/dahak-yeti Charles Reid 2018-11-05 07:22:23 -08:00
• be8f762578 fix REGUSER Charles Reid 2018-11-05 07:21:46 -08:00
• d3394e82bf update gitconfig on yeti C Reid 2018-10-28 13:52:12 -07:00
• 50af5feadc add commented out line, mainly to test committing as yammasnake Yamma Snake 2018-10-25 13:56:42 -07:00
• 57b5d5c06c Merge branch 'master' of github.com:fp9695253/dahak-yeti Florence Python 2018-10-25 13:55:17 -07:00
• a57ca399db Merge branch 'master' of github.com:dahak-metagenomics/dahak-yeti Florence Python 2018-10-25 13:55:00 -07:00
• 36281557a9 Merge branch 'master' of github.com:dahak-metagenomics/dahak-yeti C Reid 2018-10-25 13:54:20 -07:00
• e47254a4ba update sudo init to install docker compose Charles Reid 2018-10-25 13:49:46 -07:00
• 167612bbab Merge branch 'master' of github.com:fp9695253/dahak-yeti Charles Reid 2018-10-25 13:47:23 -07:00
• fddb15d05d fix the make_user.sh script Charles Reid 2018-10-25 12:28:04 -07:00
• 08bd38f984 update make user script Charles Reid 2018-10-25 12:18:51 -07:00
• e068ac01f1 make new user passwordless sudoer Florence Python 2018-10-24 22:05:05 -07:00
• af7f610c48 add the virtualenv install script Florence Python 2018-10-24 22:04:40 -07:00
• 0dcdab5c68 add virtualenv init step Florence Python 2018-10-24 22:04:26 -07:00
• 335bf4983e move the install_netdata step to tasks_sudo Charles Reid 2018-10-24 12:18:27 -07:00
• 351be0e4ae add script to cretae a user susing useradd and usermod Charles Reid 2018-10-24 12:17:56 -07:00
• 8ab26702f1
  Merge pull request #9 from dahak-metagenomics/bashprompt Chaz Reid 2018-10-21 01:12:36 -07:00
• 2c0b9d381a include beavo and yeti in bash prompt Charles Reid 2018-10-21 01:11:56 -07:00
• 9426fe2268 Merge remote-tracking branch 'gh/master' Charles Reid 2018-08-10 12:54:41 -07:00
• ff441605d4
  Merge pull request #7 from dahak-metagenomics/gitconfig Chaz Reid 2018-07-26 21:45:29 -07:00
• cdc403637b
  Merge pull request #11 from dahak-metagenomics/gitconfig Chaz Reid 2018-07-26 10:52:53 -07:00
• d190c6d4f8 add editor directive to gitconfig Charles Reid 2018-07-26 10:51:07 -07:00
• ad8d525983
  Merge pull request #10 from charlesreid1/master Chaz Reid 2018-07-25 23:30:52 -07:00
• 49bb2097e3
  Merge pull request #6 from dahak-metagenomics/dont-push-to-master Chaz Reid 2018-07-25 23:28:51 -07:00
• 76a1eeb15a DONT PUSH TO MASTER Charles Reid 2018-07-25 23:26:21 -07:00
• 37f4bdf4a4 add handy gitconfig shortcuts Charles Reid 2018-07-24 13:01:40 -07:00
• 5b09a2aa2f Merge branch 'master' of github.com:charlesreid1/dahak-yeti Charles Reid 2018-07-22 20:40:05 -07:00
• 5bda32ef1f Merge branch 'master' of github.com:dahak-metagenomics/dahak-yeti Charles Reid 2018-07-22 20:39:59 -07:00
• 77379b481e Merge branch 'master' of github.com:dahak-metagenomics/dahak-yeti into fix-instructions fix-instructions Charles Reid 2018-07-22 20:39:24 -07:00
• 2236075b6f
  Merge pull request #5 from dahak-metagenomics/fix-instructions Chaz Reid 2018-07-18 12:26:00 -07:00
• 175aa51ecb No more todo items, completed your name here 2018-07-18 12:23:20 -07:00
• a1d92788e0 change hard-coded home path to HOME var Charles Reid 2018-07-18 12:09:12 -07:00
• 8331b4caf5 update instructions: users run tasks_user, not tasks_sudo Charles Reid 2018-07-18 12:03:59 -07:00
• e7fa3d8291 clean bootstrapping process Charles Reid 2018-07-16 20:40:17 -07:00
• ee6a54e3e6
  nvm, python 3 is ony python3 Chaz Reid 2018-07-11 12:13:11 -07:00
• 2f56c29549
  aptitude installs python 2 by default, needs to install python 3 Chaz Reid 2018-07-11 12:12:02 -07:00
• 1014576682
  Update install_packages.sh Chaz Reid 2018-07-09 09:27:34 -07:00
• 0c06b158ad
  Update install_packages.sh Chaz Reid 2018-07-08 21:50:03 -07:00
• c81e298f29
  Merge pull request #4 from dahak-metagenomics/master Chaz Reid 2018-07-06 10:48:14 -07:00
• 8e465703ad
  dahak-yeti -> yeti Chaz Reid 2018-07-03 09:59:34 -07:00
• 91b189bfed
  install system python before installing singularity Chaz Reid 2018-07-03 09:56:10 -07:00
• cd92228135
  log output from install singularity script Chaz Reid 2018-07-03 09:42:20 -07:00
• 0341e0acfe add missing step to install singularity script Charles Reid 2018-07-01 10:12:16 -07:00
• d98616f85a update install singularity script - bump version and do it in /tmp Charles Reid 2018-07-01 10:10:19 -07:00
• 528eac06c4 make install_singularity.sh executable Charles Reid 2018-07-01 09:57:40 -07:00
• 6f3273faed generate ssh keys, convert singularity installation to bash script, and update sudo init script to call the bash script Charles Reid 2018-06-29 13:02:34 -07:00
• 6c95a3e3a6
  add psutil for snakemake benchmarking Chaz Reid 2018-06-19 20:24:02 -07:00
• aa989d21e7 fix some problems with the install singularity script Charles Reid 2018-06-19 15:35:07 -07:00
• 4629af0d4c
  singularity install script should do things the easy way Chaz Reid 2018-06-18 16:19:40 -07:00
• 416f5153f9
  Merge pull request #9 from charlesreid1/master Chaz Reid 2018-06-15 06:51:54 -07:00
• f8ef1d4637 Merge branch 'master' of github.com:dahak-metagenomics/dahak-yeti Charles Reid 2018-06-08 01:02:07 -07:00
• e60d48ee3a Merge branch 'master' of github.com:charlesreid1/dahak-yeti Charles Reid 2018-06-08 01:01:59 -07:00
• f0c58cf1ea fix ls aliases Charles Reid 2018-06-08 01:01:34 -07:00
• 4c4fb49bef
  add a slightly easier way to install singularity Chaz Reid 2018-06-05 17:40:35 -07:00
• 6d04b429f4
  Try slightly easier snakemake installation method Chaz Reid 2018-06-04 10:15:51 -07:00
• 8b8ec9f669 Merge branch 'master' of github.com:charlesreid1/dahak-yeti Charles Reid 2018-06-04 10:04:23 -07:00
• 28762b3c7b make scripts +x Charles Reid 2018-06-04 10:03:02 -07:00
• 5ee0d5b610 turbocharge the gitconfig Charles Reid 2018-05-22 00:27:05 -07:00
• a20652d4d8 Merge branch 'master' of github.com:dahak-metagenomics/dahak-yeti Charles Reid 2018-05-22 00:24:34 -07:00
• 7af5cb5b46
  default -> defaults per [bioconda](https://bioconda.github.io/) Chaz Reid 2018-05-21 18:36:22 -07:00
• f50951581c
  Update user_init.sh Chaz Reid 2018-05-21 18:34:58 -07:00
• ed48f2c18b pesky non-executable scripts Charles Reid 2018-05-21 18:00:21 -07:00
• 97ba7d7d13
  Update activate_conda.py Chaz Reid 2018-05-21 15:39:53 -07:00
• 4978ae1cc8
  Update install_snakemake.py Chaz Reid 2018-05-21 15:38:05 -07:00
• ba5421145e
  Update install_singularity.py Chaz Reid 2018-05-21 15:13:41 -07:00
• ae53e74f0c
  Update sudo_init.sh Chaz Reid 2018-05-21 15:10:48 -07:00
• 8787ac9862 remove old stuff Charles Reid 2018-05-18 10:46:22 -07:00
• 995fe063fb Merge branch 'master' of github.com:dahak-metagenomics/dahak-yeti Charles Reid 2018-05-18 10:45:00 -07:00
• 66eb3f38b7 ooookay here we go again. Charles Reid 2018-05-18 10:43:37 -07:00
• 621d7d7ffb
  Update .bash_profile Chaz Reid 2018-05-16 14:17:08 -07:00
• fb7b49e523
  thanks for the worthless search functionality Chaz Reid 2018-05-16 14:04:13 -07:00
• a7d224cb6e
  move gen_ssh_keys script call order Chaz Reid 2018-05-16 14:01:37 -07:00
• fa9415fe09
  typo in var name Chaz Reid 2018-05-16 13:57:58 -07:00
• 3fe4e3dec7
  Update install_pyenv.py Chaz Reid 2018-05-16 13:52:56 -07:00
• 9308c4da08
  Update cloud_init.sh Chaz Reid 2018-05-16 13:46:58 -07:00
• 292bd64a9f
  Update install_singularity.py Chaz Reid 2018-05-16 13:41:14 -07:00
• 5629bc594e
  Update install_singularity.py Chaz Reid 2018-05-16 12:56:59 -07:00
• 73f52df695
  Update sudo_init.sh Chaz Reid 2018-05-16 12:35:42 -07:00
• a897ec2300
  Update cloud_init.sh Chaz Reid 2018-05-16 12:31:42 -07:00
• 8a651c61d1
  Update user_data Chaz Reid 2018-05-16 12:26:17 -07:00
• 207bee3f53 Merge branch 'master' of github.com:dahak-metagenomics/dahak-yeti Charles Reid 2018-05-16 12:03:53 -07:00
• 079e87f936 removing old gen ssh keys file. Charles Reid 2018-05-16 12:03:40 -07:00
• aa502aa345 ugh, ssh keys AGAIN Charles Reid 2018-05-16 12:01:18 -07:00
• 73197e073a
  Update TODO.md Chaz Reid 2018-05-16 11:57:19 -07:00
• 1a9fdb41c0
  Merge pull request #2 from charlesreid1/master Chaz Reid 2018-05-16 10:55:45 -07:00
• 1620826897 update gen_ssh_keys script. (again?) Charles Reid 2018-05-04 09:26:58 -07:00
• 869b79d9c7 Merge branch 'master' of github.com:charlesreid1/dahak-yeti Charles Reid 2018-04-26 04:01:20 -07:00
• 2df13a0b41 fix bash history t prefix issue Charles Reid 2018-04-26 03:59:40 -07:00
• ca2078aeb5 Merge branch 'master' of https://github.com/charlesreid1/dahak-yeti Charles Reid 2018-04-26 03:39:23 -07:00
• ed060b3c55 fix conda activation script for the nth time Charles Reid 2018-04-26 03:39:10 -07:00
• cd2b119a1c add TODO to bootstrap ignore Charles Reid 2018-04-26 03:17:49 -07:00
• 8375b902ff fix control+_ problems Charles Reid 2018-04-20 12:03:47 -07:00
• 60fd52c1ea
  Update .vimrc snakemake settings Chaz Reid 2018-04-19 01:18:05 -07:00
• 57189a7238
  add user ubuntu to docker group Chaz Reid 2018-04-17 19:37:43 -07:00
• 48ec61f350
  Create prepare_vim.sh Chaz Reid 2018-04-17 14:31:33 -07:00
• b0265617b4
  Update pre_bootstrap.sh Chaz Reid 2018-04-17 14:28:58 -07:00
• 97a30163cc
  Update cloud_init.sh Chaz Reid 2018-04-17 14:14:33 -07:00
• c9a16b62d0
  Update cloud_init.sh Chaz Reid 2018-04-17 14:13:15 -07:00