262 Commits

Author SHA1 Message Date
04b44a3e80
Merge pull request #13 from fp9695253/master
Add virtual environment installation step, make users passwordless sudoer
2018-12-09 10:30:18 -08:00
812ee7c43f
Update make_user.sh 2018-12-09 10:29:41 -08:00
0c4afe6d54 Merge branch 'master' of github.com:dahak-metagenomics/dahak-yeti
* 'master' of github.com:dahak-metagenomics/dahak-yeti:
  update gitconfig on yeti
  fix the make_user.sh script
  update make user script
2018-11-05 07:22:23 -08:00
be8f762578 fix REGUSER 2018-11-05 07:21:46 -08:00
d3394e82bf update gitconfig on yeti 2018-10-28 13:52:12 -07:00
Yamma Snake
50af5feadc add commented out line, mainly to test committing as yammasnake 2018-10-25 13:56:42 -07:00
Florence Python
57b5d5c06c Merge branch 'master' of github.com:fp9695253/dahak-yeti
* 'master' of github.com:fp9695253/dahak-yeti:
  update sudo init to install docker compose
2018-10-25 13:55:17 -07:00
Florence Python
a57ca399db Merge branch 'master' of github.com:dahak-metagenomics/dahak-yeti
* 'master' of github.com:dahak-metagenomics/dahak-yeti:
  fix the make_user.sh script
  update make user script
2018-10-25 13:55:00 -07:00
36281557a9 Merge branch 'master' of github.com:dahak-metagenomics/dahak-yeti
* 'master' of github.com:dahak-metagenomics/dahak-yeti:
  fix the make_user.sh script
  update make user script
  move the install_netdata step to tasks_sudo
  add script to cretae a user susing useradd and usermod
  include beavo and yeti in bash prompt
2018-10-25 13:54:20 -07:00
e47254a4ba update sudo init to install docker compose 2018-10-25 13:49:46 -07:00
167612bbab Merge branch 'master' of github.com:fp9695253/dahak-yeti
* 'master' of github.com:fp9695253/dahak-yeti:
  make new user passwordless sudoer
  add the virtualenv install script
  add virtualenv init step
2018-10-25 13:47:23 -07:00
fddb15d05d fix the make_user.sh script 2018-10-25 12:28:04 -07:00
08bd38f984 update make user script 2018-10-25 12:18:51 -07:00
Florence Python
e068ac01f1 make new user passwordless sudoer 2018-10-24 22:05:05 -07:00
Florence Python
af7f610c48 add the virtualenv install script 2018-10-24 22:04:40 -07:00
Florence Python
0dcdab5c68 add virtualenv init step 2018-10-24 22:04:26 -07:00
335bf4983e move the install_netdata step to tasks_sudo 2018-10-24 12:18:27 -07:00
351be0e4ae add script to cretae a user susing useradd and usermod 2018-10-24 12:17:56 -07:00
8ab26702f1
Merge pull request #9 from dahak-metagenomics/bashprompt
bash prompt: yeti + beavo
2018-10-21 01:12:36 -07:00
2c0b9d381a include beavo and yeti in bash prompt 2018-10-21 01:11:56 -07:00
9426fe2268 Merge remote-tracking branch 'gh/master'
* gh/master:
2018-08-10 12:54:41 -07:00
ff441605d4
Merge pull request #7 from dahak-metagenomics/gitconfig
Gitconfig
2018-07-26 21:45:29 -07:00
cdc403637b
Merge pull request #11 from dahak-metagenomics/gitconfig
add editor directive to gitconfig
2018-07-26 10:52:53 -07:00
d190c6d4f8 add editor directive to gitconfig 2018-07-26 10:51:07 -07:00
ad8d525983
Merge pull request #10 from charlesreid1/master
aliases + DON'T PUSH TO MASTER
2018-07-25 23:30:52 -07:00
49bb2097e3
Merge pull request #6 from dahak-metagenomics/dont-push-to-master
DONT PUSH TO MASTER
2018-07-25 23:28:51 -07:00
76a1eeb15a DONT PUSH TO MASTER 2018-07-25 23:26:21 -07:00
37f4bdf4a4 add handy gitconfig shortcuts 2018-07-24 13:01:40 -07:00
5b09a2aa2f Merge branch 'master' of github.com:charlesreid1/dahak-yeti
* 'master' of github.com:charlesreid1/dahak-yeti:
  No more todo items, completed
  change hard-coded home path to HOME var
  update instructions: users run tasks_user, not tasks_sudo
2018-07-22 20:40:05 -07:00
5bda32ef1f Merge branch 'master' of github.com:dahak-metagenomics/dahak-yeti
* 'master' of github.com:dahak-metagenomics/dahak-yeti:
  nvm, python 3 is ony python3
  aptitude installs python 2 by default, needs to install python 3
  Update install_packages.sh
  Update install_packages.sh
  dahak-yeti -> yeti
  install system python before installing singularity
  log output from install singularity script
2018-07-22 20:39:59 -07:00
2236075b6f
Merge pull request #5 from dahak-metagenomics/fix-instructions
Fix instructions
2018-07-18 12:26:00 -07:00
175aa51ecb No more todo items, completed 2018-07-18 12:23:20 -07:00
a1d92788e0 change hard-coded home path to HOME var 2018-07-18 12:09:12 -07:00
8331b4caf5 update instructions: users run tasks_user, not tasks_sudo 2018-07-18 12:03:59 -07:00
e7fa3d8291 clean bootstrapping process 2018-07-16 20:40:17 -07:00
ee6a54e3e6
nvm, python 3 is ony python3 2018-07-11 12:13:11 -07:00
2f56c29549
aptitude installs python 2 by default, needs to install python 3 2018-07-11 12:12:02 -07:00
1014576682
Update install_packages.sh 2018-07-09 09:27:34 -07:00
0c06b158ad
Update install_packages.sh 2018-07-08 21:50:03 -07:00
c81e298f29
Merge pull request #4 from dahak-metagenomics/master
transfer updates from dahak yeti to charlesreid1 fork
2018-07-06 10:48:14 -07:00
8e465703ad
dahak-yeti -> yeti 2018-07-03 09:59:34 -07:00
91b189bfed
install system python before installing singularity 2018-07-03 09:56:10 -07:00
cd92228135
log output from install singularity script 2018-07-03 09:42:20 -07:00
0341e0acfe add missing step to install singularity script 2018-07-01 10:12:16 -07:00
d98616f85a update install singularity script - bump version and do it in /tmp 2018-07-01 10:10:19 -07:00
528eac06c4 make install_singularity.sh executable 2018-07-01 09:57:40 -07:00
6f3273faed generate ssh keys, convert singularity installation to bash script, and update sudo init script to call the bash script 2018-06-29 13:02:34 -07:00
6c95a3e3a6
add psutil for snakemake benchmarking 2018-06-19 20:24:02 -07:00
aa989d21e7 fix some problems with the install singularity script 2018-06-19 15:35:07 -07:00
4629af0d4c
singularity install script should do things the easy way 2018-06-18 16:19:40 -07:00